>scaffold00847_1153336_1153495_+_novel-3 UUCUCACCUGCCAAGGGUCCUCUGUCACAAAUGGCUUCCAGAAUUCCUUAUCCUCUGUCUCAGUGAUUACAUGCAAGAUUAAUAUGUGAGAAACCAUUCUAUGAAUGUAACAGCUAGUGGAUCUGGACGCCAUUUUGACAGAUGAACGAUGCAGAUAAGA .(((...((((...(..((.(((((((.(((((((.((((((....(((((.....((((..(((....)))...))))......)))))...(((((...((.......))...))))).)))))).)))))))))))))).)).)...))))...))) (-47.00) ....................UCUGUCACAAAUGGCUUCCAG....................................................................................................................... 1 21 1 ....................UCUGUCACAAAUGGCUUCCAGA...................................................................................................................... 42 22 1 .....................CUGUCACAAAUGGCUUCCAGA...................................................................................................................... 2 21 1 ......................UGUCACAAAUGGCUUCCAGAAU.................................................................................................................... 1 22 1 ........................UCACAAAUGGCUUCCAGAAUU................................................................................................................... 1 21 1 ........................................................................................................................AUCUGGACGCCAUUUUGACAGA.................. 1 22 1 .........................................................................................................................UCUGGACGCCAUUUUGACAGAUG................ 1 23 1 .........................................................................................................................UCUGGACGCCAUUUUGACAGA.................. 3 21 1 ..........................................................................................................................CUGGACGCCAUUUUGACAGA.................. 1 20 1 ...........................................................................................................................UGGACGCCAUUUUGACA.................... 1 17 1 ...........................................................................................................................UGGACGCCAUUUUGACAG................... 1 18 1 ...........................................................................................................................UGGACGCCAUUUUGACAGAUGA............... 1 22 1 ...........................................................................................................................UGGACGCCAUUUUGACAGAUG................ 228 21 1 ...........................................................................................................................UGGACGCCAUUUUGACAGA.................. 4 19 1 ...........................................................................................................................UGGACGCCAUUUUGACAGAU................. 6 20 1 ............................................................................................................................GGACGCCAUUUUGACAGA.................. 1 18 1 ............................................................................................................................GGACGCCAUUUUGACAGAUG................ 7 20 1 negative ........ACGGUUCCCAGGAGACAGUGU................................................................................................................................... 1 21 1 .........CGGUUCCCAGGAGACAGUG.................................................................................................................................... 1 19 1 .........CGGUUCCCAGGAGACAGUGU................................................................................................................................... 5 20 1 .........CGGUUCCCAGGAGACAGUGUU.................................................................................................................................. 54 21 1 ...............................................AAUAGGAGACAGAGUCACUAA............................................................................................ 2 21 1 ................................................AUAGGAGACAGAGUCACUAAU........................................................................................... 2 21 1 >scaffold02022_100612_100777_+_novel-10 UUUAAUCAAAAUGCUGCUAUAAUUUGCGUUUGAAUUUUUUUUCUUAAAAAAAUUACCUAGACAUGACUGUCAGUCGCAUUUGUGCUGCUGGACGUGAUUGUCAGUUGUGUCCAGCAGAGCAGAAAAAAAAUUGCCAAAUGCAAAUUAUAAUGGCAUUUUGAUGAAG ....(((((((((((..((((((((((((((((((((((((((................(((.((.....))))).....(((.((((((((((..((.....))..)))))))))).))))))))))))))..)))))))))))))))..))))))))))).... (-66.70) .....UCAAAAUGCUGCUAUAAUUUG............................................................................................................................................ 11 21 1 ......CAAAAUGCUGCUAUAAUUUGC........................................................................................................................................... 8 21 1 .......AAAAUGCUGCUAUAAUUUGCG.......................................................................................................................................... 10 21 1 .......AAAAUGCUGCUAUAAUUUG............................................................................................................................................ 7 19 1 ............................................................................................................................................CAAAUUAUAAUGGCAUUUUGA..... 9 21 1 .............................................................................................................................................AAAUUAUAAUGGCAUUUUGA..... 2 20 2 .............................................................................................................................................AAAUUAUAAUGGCAUUUUGAU.... 6 21 1 negative >scaffold02264_510281_510416_+_novel-11 AUGGAGAAAAAGCAAGGAUUUUCGGAAGGUUAUGAGAUGGGUAAGUGGGGAAGAUAACUGUGGGGCUUUCGUUUUGUUUGUUAUCUUCCCUACUCCACCCAUUCCAUAGCUUUCCGAUCGUUCCUCUCUCUCCUCA ..(((((...((..((((...(((((((((((((..((((((.(((((((((((((((.(..((((....))))..)..)))))))))))))))..))))))..)))))))))))))....)))))).)))))... (-69.80) ...GAGAAAAAGCAAGGAUUUUCGGA.............................................................................................................. 1 23 1 ...................UUUCGGAAGGUUAUGAGAUGG................................................................................................ 1 21 1 ....................UUCGGAAGGUUAUGAGAUGGG............................................................................................... 1 21 1 ......................CGGAAGGUUAUGAGAUGG................................................................................................ 1 18 1 .............................UUAUGAGAUGGGUAAGUGGGGAAGA.................................................................................. 1 25 1 ..............................UAUGAGAUGGGUAAGUGGGGA..................................................................................... 1 21 1 ...............................AUGAGAUGGGUAAGUGGGGAA.................................................................................... 1 21 1 ..................................AGAUGGGUAAGUGGGGAAGA.................................................................................. 1 20 1 ..................................AGAUGGGUAAGUGGGGAAGAUA................................................................................ 2 22 1 ...................................GAUGGGUAAGUGGGGAAGAUA................................................................................ 5 21 1 .....................................UGGGUAAGUGGGGAAGAU................................................................................. 1 18 2 .....................................UGGGUAAGUGGGGAAGAUAACUG............................................................................ 1 23 1 .....................................UGGGUAAGUGGGGAAGAUAACUGU........................................................................... 15 24 1 .....................................UGGGUAAGUGGGGAAGAUAACU............................................................................. 2 22 1 .....................................UGGGUAAGUGGGGAAGAUAA............................................................................... 35 20 1 .....................................UGGGUAAGUGGGGAAGAUAAC.............................................................................. 53 21 1 ......................................GGGUAAGUGGGGAAGAUAAC.............................................................................. 1 20 1 ....................................................................................................AUUCCAUAGCUUUCCGAUCGU............... 1 21 1 negative >scaffold02658_994069_994318_+_novel-14 UUAGUAAACUUGGAGCCAAUUUUAGUAUAAUUGGUCUAUCAAAUGGGACUCAUCAUAUGGUGGGUCUAAAUUUUUUUCUAUGUAGCUGAUAUUACAUGAAUUCAGGGGAAUACAACUUACAAUUGAAAUUGUAAGAAUUGUUAAUUCCUCAUGUUACAUGUUUUUUAAAAAGCUAUAUAAGAUCAGACUCAUCUUAUGAUGGGUCUCAUUUGGUAGAUCAAGUAUGCUAAAAUUAGCUUGUGUAUAAUUU ............((((.((((((((((((.(((((((((((((((((((((((((((.(((((((((.........(((((((((((......((((((((...(((((((((((((((((((....))))))))..))))..)))))))..))).))))).........)))))))).)))..))))))))).))))))))))))))))))))))))))).)))))))))))).))))........... (-101.26) .......................AGUAUAAUUGGUCUAUCAAAUGGG........................................................................................................................................................................................................... 2 24 1 ...............................UGGUCUAUCAAAUGGGACUCA...................................................................................................................................................................................................... 1 21 1 .................................GUCUAUCAAAUGGGACUCAUCAUA................................................................................................................................................................................................. 2 24 1 ..................................UCUAUCAAAUGGGACUCAUCA................................................................................................................................................................................................... 5 21 1 ...................................CUAUCAAAUGGGACUCAUCAUA................................................................................................................................................................................................. 1 22 1 ....................................UAUCAAAUGGGACUCAUCAUAUGG.............................................................................................................................................................................................. 1 24 1 ........................................AAAUGGGACUCAUCAUAUGGUGG........................................................................................................................................................................................... 1 23 1 ........................................AAAUGGGACUCAUCAUAUGGUGGGU......................................................................................................................................................................................... 1 25 1 ........................................AAAUGGGACUCAUCAUAUGGUG............................................................................................................................................................................................ 2 22 1 ........................................AAAUGGGACUCAUCAUAUGGU............................................................................................................................................................................................. 3 21 1 ........................................AAAUGGGACUCAUCAUAUGGUGGG.......................................................................................................................................................................................... 41 24 1 .........................................AAUGGGACUCAUCAUAUGGUGG........................................................................................................................................................................................... 1 22 1 .........................................AAUGGGACUCAUCAUAUGGUGGG.......................................................................................................................................................................................... 2 23 1 .............................................................................................................................................................................................CAUCUUAUGAUGGGUCUCAUUUG...................................... 1 23 1 .............................................................................................................................................................................................CAUCUUAUGAUGGGUCUCAUUUGG..................................... 29 24 1 ......................................................................................................................................................................................................AUGGGUCUCAUUUGGUAGAUCAAG............................ 10 24 1 .......................................................................................................................................................................................................UGGGUCUCAUUUGGUAGAUCA.............................. 1 21 1 .......................................................................................................................................................................................................UGGGUCUCAUUUGGUAGAUCAAG............................ 1 23 1 .............................................................................................................................................................................................................UCAUUUGGUAGAUCAAGUAUG........................ 2 21 1 ..................................................................................................................................................................................................................UGGUAGAUCAAGUAUGCUAAAAUU................ 4 24 1 negative ..........................................................................................................................................................................................UGAGUAGAAUACUACCCAGAGUAA........................................ 1 24 2 >scaffold02936_84627_84693_-_novel-16 GGCCCAUGGCCUAGAGUAGUGACCUCCAUUGCACUUAGGAGGGGUGCUGCUCUAAGGUCUCCCCAAG ((.....((((((((((((((.(((((..........)))))..))))))))).)))))...))... (-28.60) ....CAUGGCCUAGAGUAGUGACCUC......................................... 1 22 1 ....CAUGGCCUAGAGUAGUGACCUCC........................................ 2 23 1 .....AUGGCCUAGAGUAGUGACCUCC........................................ 17 22 1 .....AUGGCCUAGAGUAGUGAC............................................ 2 18 1 .....AUGGCCUAGAGUAGUGACCUC......................................... 44 21 1 ......UGGCCUAGAGUAGUGACCU.......................................... 1 19 1 ......UGGCCUAGAGUAGUGACCUCCAUU..................................... 1 24 1 ......UGGCCUAGAGUAGUGACCUCCA....................................... 31 22 1 ......UGGCCUAGAGUAGUGACCUCC........................................ 338 21 1 ......UGGCCUAGAGUAGUGACCUC......................................... 4 20 1 .......................................AGGGGUGCUGCUCUAAGGU......... 1 19 4 .......................................AGGGGUGCUGCUCUAAGGUCU....... 1 21 4 .......................................AGGGGUGCUGCUCUAAGGUCUCCCCA.. 1 26 4 .......................................AGGGGUGCUGCUCUAAGGUCUC...... 2 22 4 .............................................GCUGCUCUAAGGUCUCCCCAA. 1 21 4 negative >scaffold03604_533307_533466_-_novel-20 UUGCAGAUUGGAAGAGAGAAAGAGAGUGCUAGAGGAAGUUAAUGGAGAUGGGUGGCUCGGGAAGAAGAAAAAGAGGCCUAGUCUUCUUCCCGACACCACCCAUUCCAUCCACUUCCUCCAACUUCUCUCUUUCUCUUACUUUCACAUCUCUGUAAGUACA (((((((.((((((((((((((((((.....((((((((..((((((.(((((((.((((((((((((...((....))..))))))))))))..)))))))))))))..))))))))......))))))))))))..))))))....)))))))..... (-84.20) ........UGGAAGAGAGAAAGAGAGUGC................................................................................................................................... 1 21 1 ..................AAAGAGAGUGCUAGAGGAAGU......................................................................................................................... 1 21 1 ...................AAGAGAGUGCUAGAGGAAGUUAAU..................................................................................................................... 1 24 1 ...................AAGAGAGUGCUAGAGGAAGUU........................................................................................................................ 2 21 1 .....................GAGAGUGCUAGAGGAAGUUA....................................................................................................................... 1 20 1 ......................AGAGUGCUAGAGGAAGUUAA...................................................................................................................... 1 20 1 ......................AGAGUGCUAGAGGAAGUUAAU..................................................................................................................... 11 21 1 .......................GAGUGCUAGAGGAAGUUA....................................................................................................................... 1 18 1 .......................GAGUGCUAGAGGAAGUUAAUG.................................................................................................................... 1 21 1 .......................GAGUGCUAGAGGAAGUUAAUGGAG................................................................................................................. 1 24 1 .......................GAGUGCUAGAGGAAGUUAAU..................................................................................................................... 10 20 1 .......................GAGUGCUAGAGGAAGUUAAUGGAGA................................................................................................................ 2 25 1 .......................GAGUGCUAGAGGAAGUU........................................................................................................................ 4 17 1 ........................AGUGCUAGAGGAAGUUAAUGG................................................................................................................... 7 21 1 .........................GUGCUAGAGGAAGUUAAUGG................................................................................................................... 7 20 1 ..............................AGAGGAAGUUAAUGGAG................................................................................................................. 1 17 2 ..............................AGAGGAAGUUAAUGGAGA................................................................................................................ 1 18 2 ..............................AGAGGAAGUUAAUGGAGAUGGGUG.......................................................................................................... 1 24 1 ..............................AGAGGAAGUUAAUGGAGAUGGG............................................................................................................ 10 22 1 ..............................AGAGGAAGUUAAUGGAGAUGG............................................................................................................. 2 21 1 ................................AGGAAGUUAAUGGAGAUGGGUG.......................................................................................................... 8 22 1 .................................GGAAGUUAAUGGAGAUGGGUGG......................................................................................................... 1 22 1 .................................GGAAGUUAAUGGAGAUGGGUG.......................................................................................................... 2 21 1 ..................................GAAGUUAAUGGAGAUGGGUGGC........................................................................................................ 1 22 1 ...................................AAGUUAAUGGAGAUGGGUGGCUCGG.................................................................................................... 2 25 1 ...................................AAGUUAAUGGAGAUGGGUGGCUCG..................................................................................................... 6 24 1 ....................................AGUUAAUGGAGAUGGGUG.......................................................................................................... 1 18 2 ....................................AGUUAAUGGAGAUGGGUGGC........................................................................................................ 1 20 1 ....................................AGUUAAUGGAGAUGGGUGGCU....................................................................................................... 1 21 1 ....................................AGUUAAUGGAGAUGGGUGGCUC...................................................................................................... 1 22 1 .....................................GUUAAUGGAGAUGGGUGGC........................................................................................................ 1 19 1 .....................................GUUAAUGGAGAUGGGUGGCUC...................................................................................................... 2 21 1 ......................................UUAAUGGAGAUGGGUGGCU....................................................................................................... 1 19 1 ......................................UUAAUGGAGAUGGGUGGCUCGGGAA................................................................................................. 1 25 1 ......................................UUAAUGGAGAUGGGUGGCUCG..................................................................................................... 2 21 1 .......................................UAAUGGAGAUGGGUGGCUCGGGA.................................................................................................. 10 23 1 .......................................UAAUGGAGAUGGGUGGCUCGGGAA................................................................................................. 32 24 1 .......................................UAAUGGAGAUGGGUGGCU....................................................................................................... 4 18 1 .......................................UAAUGGAGAUGGGUGGCUC...................................................................................................... 4 19 1 .......................................UAAUGGAGAUGGGUGGCUCG..................................................................................................... 4 20 1 .......................................UAAUGGAGAUGGGUGGCUCGGGAAGA............................................................................................... 4 26 1 .......................................UAAUGGAGAUGGGUGGCUCGGG................................................................................................... 8 22 1 .......................................UAAUGGAGAUGGGUGGCUCGG.................................................................................................... 9 21 1 ........................................AAUGGAGAUGGGUGGCU....................................................................................................... 1 17 2 ........................................AAUGGAGAUGGGUGGCUCG..................................................................................................... 1 19 1 ........................................AAUGGAGAUGGGUGGCUCGGGAAG................................................................................................ 1 24 1 ........................................AAUGGAGAUGGGUGGCUCGGGAA................................................................................................. 12 23 1 ........................................AAUGGAGAUGGGUGGCUC...................................................................................................... 3 18 2 ........................................AAUGGAGAUGGGUGGCUCGG.................................................................................................... 3 20 1 ........................................AAUGGAGAUGGGUGGCUCGGGAAGA............................................................................................... 31 25 1 ........................................AAUGGAGAUGGGUGGCUCGGG................................................................................................... 73 21 1 ........................................AAUGGAGAUGGGUGGCUCGGGA.................................................................................................. 9 22 1 .........................................AUGGAGAUGGGUGGCUC...................................................................................................... 1 17 2 .........................................AUGGAGAUGGGUGGCUCGG.................................................................................................... 1 19 1 .........................................AUGGAGAUGGGUGGCUCGGG................................................................................................... 1 20 1 .........................................AUGGAGAUGGGUGGCUCGGGA.................................................................................................. 2 21 1 .........................................AUGGAGAUGGGUGGCUCGGGAAGA............................................................................................... 2 24 1 .........................................AUGGAGAUGGGUGGCUCGGGAA................................................................................................. 3 22 1 ..........................................UGGAGAUGGGUGGCUCGGGAA................................................................................................. 1 21 1 ..........................................UGGAGAUGGGUGGCUCGGGA.................................................................................................. 2 20 1 ..........................................UGGAGAUGGGUGGCUCGGGAAGA............................................................................................... 3 23 1 ..........................................UGGAGAUGGGUGGCUCGGGAAG................................................................................................ 37 22 1 ..........................................UGGAGAUGGGUGGCUCGGGAAGAA.............................................................................................. 4 24 1 ..........................................UGGAGAUGGGUGGCUCGGGAAGAAG............................................................................................. 6 25 1 ...........................................GGAGAUGGGUGGCUCGGGAA................................................................................................. 1 20 1 ...........................................GGAGAUGGGUGGCUCGGGAAG................................................................................................ 16 21 1 ...........................................GGAGAUGGGUGGCUCGGGAAGAAGAA........................................................................................... 2 26 1 ...........................................GGAGAUGGGUGGCUCGGGAAGAAG............................................................................................. 303 24 1 ...........................................GGAGAUGGGUGGCUCGGGAAGAA.............................................................................................. 41 23 1 ...........................................GGAGAUGGGUGGCUCGGGAAGAAGA............................................................................................ 87 25 1 ...........................................GGAGAUGGGUGGCUCGGGAAGA............................................................................................... 953 22 1 ............................................GAGAUGGGUGGCUCGGGAAGA............................................................................................... 101 21 1 ............................................GAGAUGGGUGGCUCGGGAAGAA.............................................................................................. 11 22 1 ............................................GAGAUGGGUGGCUCGGGAAG................................................................................................ 3 20 1 ............................................GAGAUGGGUGGCUCGGGAAGAAG............................................................................................. 31 23 1 ............................................GAGAUGGGUGGCUCGGGAAGAAGA............................................................................................ 91 24 1 .............................................AGAUGGGUGGCUCGGGA.................................................................................................. 1 17 1 .............................................AGAUGGGUGGCUCGGGAAGAAGAAAA......................................................................................... 1 26 1 .............................................AGAUGGGUGGCUCGGGAAGAAGA............................................................................................ 1594 23 1 .............................................AGAUGGGUGGCUCGGGAAGAAGAA........................................................................................... 17 24 1 .............................................AGAUGGGUGGCUCGGGAAGAAG............................................................................................. 19107 22 1 .............................................AGAUGGGUGGCUCGGGAAGAA.............................................................................................. 255 21 1 .............................................AGAUGGGUGGCUCGGGAAG................................................................................................ 26 19 1 .............................................AGAUGGGUGGCUCGGGAA................................................................................................. 4 18 1 .............................................AGAUGGGUGGCUCGGGAAGA............................................................................................... 69 20 1 ..............................................GAUGGGUGGCUCGGGAAGAAGAAAAA........................................................................................ 1 26 1 ..............................................GAUGGGUGGCUCGGGAAGA............................................................................................... 14 19 1 ..............................................GAUGGGUGGCUCGGGAAGAAG............................................................................................. 1539 21 1 ..............................................GAUGGGUGGCUCGGGAAGAAGAAAA......................................................................................... 3 25 1 ..............................................GAUGGGUGGCUCGGGAAGAA.............................................................................................. 47 20 1 ..............................................GAUGGGUGGCUCGGGAAGAAGAA........................................................................................... 483 23 1 ..............................................GAUGGGUGGCUCGGGAAGAAGA............................................................................................ 537 22 1 ..............................................GAUGGGUGGCUCGGGAAG................................................................................................ 6 18 1 ..............................................GAUGGGUGGCUCGGGAAGAAGAAA.......................................................................................... 88 24 1 ...............................................AUGGGUGGCUCGGGAAGAAG............................................................................................. 104 20 1 ...............................................AUGGGUGGCUCGGGAAG................................................................................................ 2 17 1 ...............................................AUGGGUGGCUCGGGAAGA............................................................................................... 22 18 1 ...............................................AUGGGUGGCUCGGGAAGAAGA............................................................................................ 258 21 1 ...............................................AUGGGUGGCUCGGGAAGAA.............................................................................................. 4 19 1 ...............................................AUGGGUGGCUCGGGAAGAAGAA........................................................................................... 5 22 1 ...............................................AUGGGUGGCUCGGGAAGAAGAAA.......................................................................................... 7 23 1 ................................................UGGGUGGCUCGGGAAGAAGAAAAAG....................................................................................... 1 25 1 ................................................UGGGUGGCUCGGGAAGAAGAAA.......................................................................................... 15 22 1 ................................................UGGGUGGCUCGGGAAGA............................................................................................... 3 17 1 ................................................UGGGUGGCUCGGGAAGAAGA............................................................................................ 35 20 1 ................................................UGGGUGGCUCGGGAAGAAG............................................................................................. 4 19 1 ................................................UGGGUGGCUCGGGAAGAAGAA........................................................................................... 4 21 1 ................................................UGGGUGGCUCGGGAAGAAGAAAAA........................................................................................ 8 24 1 .................................................GGGUGGCUCGGGAAGAA.............................................................................................. 1 17 1 .................................................GGGUGGCUCGGGAAGAAGAAA.......................................................................................... 1 21 1 .................................................GGGUGGCUCGGGAAGAAGA............................................................................................ 3 19 1 ..................................................GGUGGCUCGGGAAGAAG............................................................................................. 1 17 2 ..................................................GGUGGCUCGGGAAGAAGAAA.......................................................................................... 1 20 1 ..................................................GGUGGCUCGGGAAGAAGAAAA......................................................................................... 1 21 1 ..................................................GGUGGCUCGGGAAGAAGAAAAAGA...................................................................................... 1 24 1 ...................................................GUGGCUCGGGAAGAAGAAAAAG....................................................................................... 1 22 1 ....................................................UGGCUCGGGAAGAAGAAAAA........................................................................................ 1 20 1 ....................................................UGGCUCGGGAAGAAGAAAAAG....................................................................................... 1 21 1 ....................................................UGGCUCGGGAAGAAGAAAAAGAG..................................................................................... 1 23 1 ....................................................UGGCUCGGGAAGAAGAAAAAGAGGCC.................................................................................. 5 26 1 .......................................................CUCGGGAAGAAGAAAAAGA...................................................................................... 1 19 3 .......................................................CUCGGGAAGAAGAAAAAGAGG.................................................................................... 1 21 1 .......................................................CUCGGGAAGAAGAAAAAGAGGC................................................................................... 2 22 1 ........................................................UCGGGAAGAAGAAAAAGAGGCC.................................................................................. 1 22 1 ........................................................UCGGGAAGAAGAAAAAGAGGCCU................................................................................. 1 23 1 ........................................................UCGGGAAGAAGAAAAAGAGGC................................................................................... 20 21 1 ...........................................................GGAAGAAGAAAAAGAGGCCUAGUCU............................................................................ 1 25 1 ...........................................................................GCCUAGUCUUCUUCCCGACAC................................................................ 1 21 1 ...................................................................................UUCUUCCCGACACCACCCAU......................................................... 1 20 1 ...................................................................................UUCUUCCCGACACCACCCAUUCC...................................................... 1 23 1 ...................................................................................UUCUUCCCGACACCACCCAUUC....................................................... 6 22 1 ....................................................................................UCUUCCCGACACCACCCAUU........................................................ 1 20 1 ....................................................................................UCUUCCCGACACCACCCAUUC....................................................... 1 21 1 ....................................................................................UCUUCCCGACACCACCCAUUCC...................................................... 15 22 1 .....................................................................................CUUCCCGACACCACCCAUUCC...................................................... 1 21 1 .....................................................................................CUUCCCGACACCACCCAUUCCAUC................................................... 1 24 1 .....................................................................................CUUCCCGACACCACCCAUUCCAU.................................................... 2 23 1 ......................................................................................UUCCCGACACCACCCAU......................................................... 1 17 1 ......................................................................................UUCCCGACACCACCCAUUCC...................................................... 1 20 1 ......................................................................................UUCCCGACACCACCCAUUCCAU.................................................... 124 22 1 ......................................................................................UUCCCGACACCACCCAUUCCA..................................................... 7 21 1 .......................................................................................UCCCGACACCACCCAUUCCAU.................................................... 12 21 1 ........................................................................................CCCGACACCACCCAUUCCAU.................................................... 1 20 1 .........................................................................................CCGACACCACCCAUUCCAU.................................................... 3 19 1 ............................................................................................ACACCACCCAUUCCAUCCACUUCC............................................ 1 24 1 ....................................................................................................CAUUCCAUCCACUUCCUCCAA....................................... 3 21 1 .....................................................................................................AUUCCAUCCACUUCCUCCAA....................................... 1 20 1 ..........................................................................................................AUCCACUUCCUCCAACUUCUC................................. 4 21 1 .......................................................................................................................................UUACUUUCACAUCUCUGUAAG.... 1 21 1 ..........................................................................................................................................CUUUCACAUCUCUGUAAGUAC. 1 21 1 ...........................................................................................................................................UUUCACAUCUCUGUAAGUACA 1 21 1 negative >scaffold03802_905079_905143_+_novel-21 AAAUAAUGUUAUUUGAUCAAGGGAAAUUCUUAGGUAUUUCCCUUGAUCAAAUAACAUAAUGAUCA .....((((((((((((((((((((((........))))))))))))))))))))))........ (-31.20) ......UGUUAUUUGAUCAAGGGAAA....................................... 1 20 2 ......UGUUAUUUGAUCAAGGGAAAUU..................................... 1 22 2 ......UGUUAUUUGAUCAAGGGAAAU...................................... 83 21 2 ........UUAUUUGAUCAAGGGAAAUUC.................................... 143 21 2 ........UUAUUUGAUCAAGGGAAAU...................................... 4 19 2 ........UUAUUUGAUCAAGGGAAAUU..................................... 6 20 2 ...........UUUGAUCAAGGGAAAUUC.................................... 1 18 2 .....................................UUCCCUUGAUCAAAUAACAUA....... 2 21 2 negative ...................................UAAAGGGAACUAGUUUAUU........... 4 19 2 ...................................UAAAGGGAACUAGUUUAUUGU......... 83 21 2 ....................................AAAGGGAACUAGUUUAUUGU......... 1 20 2 >scaffold05335_14983_15180_-_novel-24 UACAGUGGAGAGCAAAAAUGCUAAAUUUCAUUUUUUGAUUCAAAUUUAUCUUUAAACUAUCAUUAAAUGGGCAAAUAAACUAAGGAGAGCUCAUAUUCUUAAAUCUUCACAAGUGAUGGUUUUAUUUAGCUUUUUAAUGAUUGUUUUGGGGUAAAUUUGGACCAAAAAAUAUAGUUUGAUAUUUUUCGCCCCACUGCA ..((((((.(.(((((((((.((((((..((((((((.(((((((((((((..((((.(((((((((.(((((((((((.((((((.........)))))).(((.(((....))).)))))))))).))))))))))))).))))..))))))))))))).))))))))..)))))).))))))).))))))))).. (-61.80) ................................................................................................................................................UUUGGGGUAAAUUUGGACCAA................................. 1 21 1 ................................................................................................................................................UUUGGGGUAAAUUUGGACCAAAA............................... 1 23 1 ................................................................................................................................................UUUGGGGUAAAUUUGGACCAAA................................ 40 22 1 .................................................................................................................................................UUGGGGUAAAUUUGGACCAAA................................ 5 21 1 negative >scaffold05694_371116_371230_-_novel-27 UGUUUUAUCUCACUUUUGGCUCAUGGUUCUGGCCUUUUGAGUUUGAGAAGACACAGCUGUUGUCUUCUCAAACCCUGAAGGCCAGAAGCAGGAACCAAAAGCAAGAUAAUGCAUC (((.((((((..(((((((.((.((.(((((((((((.(.((((((((((((((....).))))))))))))).).))))))))))).)).)).)))))))..)))))).))).. (-60.60) ..........CACUUUUGGCUCAUGGUUCUGG................................................................................... 2 22 1 ..........CACUUUUGGCUCAUGGUUCU..................................................................................... 3 20 1 ..........................UUCUGGCCUUUUGAGUUUGAGAAG................................................................. 1 24 1 ...........................UCUGGCCUUUUGAGUUUGAGAAGA................................................................ 1 24 1 .............................UGGCCUUUUGAGUUUGAGAAGAC............................................................... 1 23 1 .............................UGGCCUUUUGAGUUUGAGAAG................................................................. 2 21 1 .............................UGGCCUUUUGAGUUUGAGAAGA................................................................ 2 22 1 .............................UGGCCUUUUGAGUUUGAGAAGACA.............................................................. 88 24 1 ..............................GGCCUUUUGAGUUUGAGAAGACA.............................................................. 7 23 1 ................................................................UUCUCAAACCCUGAAGGCCAGAAG........................... 2 24 1 ................................................................UUCUCAAACCCUGAAGGCCAGAAGC.......................... 2 25 1 .................................................................UCUCAAACCCUGAAGGCCAGAAG........................... 1 23 1 .................................................................UCUCAAACCCUGAAGGCCAGAAGC.......................... 10 24 1 .................................................................UCUCAAACCCUGAAGGCCAGA............................. 2 21 1 ..................................................................CUCAAACCCUGAAGGCCAGAAGC.......................... 1 23 1 ...................................................................UCAAACCCUGAAGGCCAGAAGC.......................... 1 22 1 .........................................................................CCUGAAGGCCAGAAGCAGGAA..................... 1 21 1 .............................................................................AAGGCCAGAAGCAGGAACCA.................. 1 20 1 .............................................................................AAGGCCAGAAGCAGGAACCAAAAG.............. 1 24 1 ..............................................................................AGGCCAGAAGCAGGAACCAAAAGC............. 1 24 1 ..................................................................................CAGAAGCAGGAACCAAAAGCA............ 1 21 1 ..................................................................................CAGAAGCAGGAACCAAAAGCAA........... 2 22 1 ..................................................................................CAGAAGCAGGAACCAAAAGCAAG.......... 3 23 1 ...................................................................................AGAAGCAGGAACCAAAAGCAA........... 1 21 1 ....................................................................................GAAGCAGGAACCAAAAGCAAG.......... 3 21 1 negative ....................................................UGUCGACAACAGAAGAGUUUGGGA....................................... 1 24 1 >scaffold05875_2354583_2354832_-_novel-28 AAUAAUGAAACUAUGAAUUGUUAUGAGAAAACCAUGUAGAACAAACACCUCAGUCAUAGCAGGCACUAUUAAUAUUUCUAAAGUAUGCUCUUCCAAUACUUACAAAUCAGUGCAUGAGUGAAAUGCCAAGAGUGUUUAUUUGCAAGUAUUGGAAGAGCUUACUUUAAAUCUAUUAAUAGUGCUGCUAUGGUUGAGGCGAUUGUUCUACAUGGUUUCCUCAUAACAAACCACAGUUCCAUUAUUUUUUGCC (((((((.((((.((..((((((((((.((((((((((((((((.(.(((((..((((((((.(((((((((((..(.(((((((.(((((((((((((((.(((((....((((...((......))...))))..))))).))))))))))))))).))))))).)..)))))))))))))))))))..))))).).)))))))))))))))).))))))))))..)).)))).)))))))....... (-124.70) ....................UUAUGAGAAAACCAUGUAGAAC................................................................................................................................................................................................................ 1 22 2 ....................UUAUGAGAAAACCAUGUAGAA................................................................................................................................................................................................................. 17 21 2 .....................UAUGAGAAAACCAUGUAGAAC................................................................................................................................................................................................................ 2 21 2 .......................UGAGAAAACCAUGUAGAACAA.............................................................................................................................................................................................................. 1 21 2 .........................AGAAAACCAUGUAGAACAAAC............................................................................................................................................................................................................ 3 21 1 ............................AAACCAUGUAGAACAAAC............................................................................................................................................................................................................ 1 18 2 ..............................ACCAUGUAGAACAAACACCUC....................................................................................................................................................................................................... 1 21 1 ...............................CCAUGUAGAACAAACACCUCA...................................................................................................................................................................................................... 1 21 1 ..................................UGUAGAACAAACACCUCAGUC................................................................................................................................................................................................... 2 21 1 ...................................GUAGAACAAACACCUCAGUCAUA................................................................................................................................................................................................ 1 23 1 .....................................AGAACAAACACCUCAGUCAUAGCA............................................................................................................................................................................................. 2 24 1 .........................................CAAACACCUCAGUCAUAGCAGG........................................................................................................................................................................................... 1 22 1 ...........................................AACACCUCAGUCAUAGCAGGCA......................................................................................................................................................................................... 1 22 1 ................................................CUCAGUCAUAGCAGGCACUAUU.................................................................................................................................................................................... 1 22 1 ................................................CUCAGUCAUAGCAGGCACUAUUA................................................................................................................................................................................... 1 23 1 .................................................UCAGUCAUAGCAGGCACUAUU.................................................................................................................................................................................... 10 21 1 .................................................UCAGUCAUAGCAGGCACUAUUA................................................................................................................................................................................... 24 22 1 ...................................................AGUCAUAGCAGGCACUAUUAAUAU............................................................................................................................................................................... 2 24 1 ...................................................AGUCAUAGCAGGCACUAUUAAUAUU.............................................................................................................................................................................. 2 25 1 .....................................................UCAUAGCAGGCACUAUUAAUAU............................................................................................................................................................................... 1 22 1 ......................................................CAUAGCAGGCACUAUUAAUAUU.............................................................................................................................................................................. 1 22 1 .......................................................AUAGCAGGCACUAUUAAUA................................................................................................................................................................................ 1 19 1 .......................................................AUAGCAGGCACUAUUAAUAUUU............................................................................................................................................................................. 12 22 1 .......................................................AUAGCAGGCACUAUUAAUAUU.............................................................................................................................................................................. 2 21 1 ........................................................UAGCAGGCACUAUUAAUAUUUC............................................................................................................................................................................ 5 22 1 .......................................................................AUAUUUCUAAAGUAUGCUCUUCC............................................................................................................................................................ 1 23 1 ............................................................................UCUAAAGUAUGCUCUUCCAAU......................................................................................................................................................... 3 21 1 ...............................................................................AAAGUAUGCUCUUCCAAUACUUAC................................................................................................................................................... 1 24 1 ................................................................................AAGUAUGCUCUUCCAAUACUUACA.................................................................................................................................................. 1 24 1 .........................................................................................................................................AUUUGCAAGUAUUGGAAGAGCUUA......................................................................................... 3 24 1 ..........................................................................................................................................UUUGCAAGUAUUGGAAGAGCUUAC........................................................................................ 1 24 1 ..........................................................................................................................................UUUGCAAGUAUUGGAAGAGCU........................................................................................... 10 21 1 ..........................................................................................................................................UUUGCAAGUAUUGGAAGAGCUUA......................................................................................... 4 23 1 ...........................................................................................................................................UUGCAAGUAUUGGAAGAGCUUAC........................................................................................ 1 23 1 ...........................................................................................................................................UUGCAAGUAUUGGAAGAGCUUACU....................................................................................... 1 24 1 ...........................................................................................................................................UUGCAAGUAUUGGAAGAGCUU.......................................................................................... 2 21 1 ............................................................................................................................................UGCAAGUAUUGGAAGAGCUUACUU...................................................................................... 1 24 1 .............................................................................................................................................GCAAGUAUUGGAAGAGCUUACUUU..................................................................................... 4 24 1 ..............................................................................................................................................CAAGUAUUGGAAGAGCUUACU....................................................................................... 1 21 1 ..............................................................................................................................................CAAGUAUUGGAAGAGCUUACUUUA.................................................................................... 12 24 1 ..............................................................................................................................................CAAGUAUUGGAAGAGCUUACUU...................................................................................... 2 22 1 ..............................................................................................................................................CAAGUAUUGGAAGAGCUUACUUU..................................................................................... 5 23 1 ...............................................................................................................................................AAGUAUUGGAAGAGCUUACUUU..................................................................................... 1 22 2 ...............................................................................................................................................AAGUAUUGGAAGAGCUUACUUUA.................................................................................... 1 23 2 ...............................................................................................................................................AAGUAUUGGAAGAGCUUACUU...................................................................................... 13 21 2 ...............................................................................................................................................AAGUAUUGGAAGAGCUUACUUUAA................................................................................... 19 24 1 ...............................................................................................................................................AAGUAUUGGAAGAGCUUACU....................................................................................... 2 20 2 ................................................................................................................................................AGUAUUGGAAGAGCUUACUUUAAAU................................................................................. 1 25 1 ................................................................................................................................................AGUAUUGGAAGAGCUUACUUUAAA.................................................................................. 2 24 1 .................................................................................................................................................GUAUUGGAAGAGCUUACUUUAAA.................................................................................. 1 23 1 ..................................................................................................................................................UAUUGGAAGAGCUUACU....................................................................................... 1 17 2 ..................................................................................................................................................UAUUGGAAGAGCUUACUUUA.................................................................................... 1 20 2 ..................................................................................................................................................UAUUGGAAGAGCUUACUUUAA................................................................................... 186 21 1 ..................................................................................................................................................UAUUGGAAGAGCUUACUUUAAA.................................................................................. 22 22 1 ..................................................................................................................................................UAUUGGAAGAGCUUACUUUAAAUC................................................................................ 4 24 1 ...................................................................................................................................................AUUGGAAGAGCUUACUUUAAAUC................................................................................ 1 23 1 ...................................................................................................................................................AUUGGAAGAGCUUACUUUAA................................................................................... 12 20 1 ...................................................................................................................................................AUUGGAAGAGCUUACUUUAAAU................................................................................. 2 22 1 ...................................................................................................................................................AUUGGAAGAGCUUACUUUAAA.................................................................................. 28 21 1 ....................................................................................................................................................UUGGAAGAGCUUACUUUAA................................................................................... 1 19 1 ....................................................................................................................................................UUGGAAGAGCUUACUUUAAAU................................................................................. 432 21 1 ....................................................................................................................................................UUGGAAGAGCUUACUUUAAA.................................................................................. 47 20 1 ....................................................................................................................................................UUGGAAGAGCUUACUUUAAAUC................................................................................ 8 22 1 .....................................................................................................................................................UGGAAGAGCUUACUUUAAA.................................................................................. 3 19 2 .....................................................................................................................................................UGGAAGAGCUUACUUUAAAU................................................................................. 9 20 1 ......................................................................................................................................................GGAAGAGCUUACUUUAA................................................................................... 1 17 2 ......................................................................................................................................................GGAAGAGCUUACUUUAAAU................................................................................. 2 19 1 .........................................................................................................................................................................CUAUUAAUAGUGCUGCUAUGG............................................................ 2 21 1 ..........................................................................................................................................................................UAUUAAUAGUGCUGCUAUGGU........................................................... 3 21 1 .............................................................................................................................................................................UAAUAGUGCUGCUAUGGUUGAG....................................................... 1 22 1 ..............................................................................................................................................................................AAUAGUGCUGCUAUGGUUGAG....................................................... 1 21 1 ...............................................................................................................................................................................AUAGUGCUGCUAUGGUUGAGG...................................................... 1 21 1 ................................................................................................................................................................................UAGUGCUGCUAUGGUUGAGG...................................................... 1 20 1 ................................................................................................................................................................................UAGUGCUGCUAUGGUUGAGGC..................................................... 3 21 1 ...................................................................................................................................................................................UGCUGCUAUGGUUGAGGCGAU.................................................. 2 21 1 ........................................................................................................................................................................................CUAUGGUUGAGGCGAUUGUUC............................................. 1 21 1 .........................................................................................................................................................................................UAUGGUUGAGGCGAUUGUUCUACA......................................... 1 24 1 .........................................................................................................................................................................................UAUGGUUGAGGCGAUUGUUCU............................................ 7 21 1 ...........................................................................................................................................................................................UGGUUGAGGCGAUUGUUCUACAUG....................................... 1 24 1 ...........................................................................................................................................................................................UGGUUGAGGCGAUUGUUCUAC.......................................... 3 21 2 ............................................................................................................................................................................................GGUUGAGGCGAUUGUUCUACA......................................... 1 21 2 .............................................................................................................................................................................................GUUGAGGCGAUUGUUCUACAUG....................................... 12 22 1 .............................................................................................................................................................................................GUUGAGGCGAUUGUUCUACAUGGUU.................................... 2 25 1 .............................................................................................................................................................................................GUUGAGGCGAUUGUUCUACAUGGU..................................... 3 24 1 ..............................................................................................................................................................................................UUGAGGCGAUUGUUCUACAUGG...................................... 1 22 1 ..............................................................................................................................................................................................UUGAGGCGAUUGUUCUACAUG....................................... 163 21 1 ..............................................................................................................................................................................................UUGAGGCGAUUGUUCUACAUGGUU.................................... 3 24 1 ...............................................................................................................................................................................................UGAGGCGAUUGUUCUACAUGGUUU................................... 1 24 1 ...............................................................................................................................................................................................UGAGGCGAUUGUUCUACAUGG...................................... 11 21 1 ...............................................................................................................................................................................................UGAGGCGAUUGUUCUACAUG....................................... 5 20 2 ................................................................................................................................................................................................GAGGCGAUUGUUCUACAUG....................................... 3 19 2 ................................................................................................................................................................................................GAGGCGAUUGUUCUACAUGG...................................... 3 20 1 .................................................................................................................................................................................................AGGCGAUUGUUCUACAUGGUUU................................... 1 22 1 .................................................................................................................................................................................................AGGCGAUUGUUCUACAUGGUUUC.................................. 1 23 1 .................................................................................................................................................................................................AGGCGAUUGUUCUACAUGGUUUCC................................. 1 24 1 .................................................................................................................................................................................................AGGCGAUUGUUCUACAUGGUU.................................... 16 21 1 ..................................................................................................................................................................................................GGCGAUUGUUCUACAUGGUUU................................... 2 21 1 ...................................................................................................................................................................................................GCGAUUGUUCUACAUGGUUUC.................................. 2 21 1 ....................................................................................................................................................................................................CGAUUGUUCUACAUGGUUUC.................................. 1 20 1 ....................................................................................................................................................................................................CGAUUGUUCUACAUGGUUUCC................................. 4 21 1 .....................................................................................................................................................................................................GAUUGUUCUACAUGGUUUCC................................. 1 20 1 .......................................................................................................................................................................................................UUGUUCUACAUGGUUUCCUCA.............................. 2 21 2 ..........................................................................................................................................................................................................UUCUACAUGGUUUCCUCAUAA........................... 1 21 2 ..........................................................................................................................................................................................................UUCUACAUGGUUUCCUCAUAAC.......................... 1 22 2 negative >scaffold05884_79762_79829_+_novel-29 AAGUCUCCUUAAGGCUUCGUCAGCGGUUCAGAGAUUCUCUGAAUCCCUGACGAAGCCUUGAAUGCUGC .(((....(((((((((((((((.(((((((((...))))))))).)))))))))))))))..))).. (-38.00) ..........AAGGCUUCGUCAGCGGUUCAGAGA.................................. 2 24 1 .............GCUUCGUCAGCGGUUCAG..................................... 1 18 1 .............GCUUCGUCAGCGGUUCAGAG................................... 1 20 1 .............GCUUCGUCAGCGGUUCAGAGA.................................. 1 21 1 .............GCUUCGUCAGCGGUUCAGAGAUU................................ 1 23 1 .............GCUUCGUCAGCGGUUCAGAGAU................................. 2 22 1 ..............CUUCGUCAGCGGUUCAGAGAUU................................ 1 22 1 ....................................CUCUGAAUCCCUGACGAAGCCU.......... 3 22 1 .....................................UCUGAAUCCCUGACGAAGCCUU......... 2 22 1 .....................................UCUGAAUCCCUGACGAAGCCU.......... 232 21 1 .....................................UCUGAAUCCCUGACGAAGC............ 4 19 1 .....................................UCUGAAUCCCUGACGAAGCC........... 6 20 1 ......................................CUGAAUCCCUGACGAAGCCU.......... 1 20 1 ......................................CUGAAUCCCUGACGAAGCCUUGAAU..... 1 25 1 .......................................UGAAUCCCUGACGAAGCCUUGAA...... 1 23 1 .......................................UGAAUCCCUGACGAAGCCUUGAAU..... 3 24 1 negative ........AAUUCCGAAGCAGUCGCCAAGUC..................................... 1 23 1 >scaffold05890_126_236_-_novel-30 UGCUUUGAUCAACCUUUUUUAUAUCAUGCAUAAUUAAGAAAAUAAUUAUCAAUUUGAAUCUGAAAAUUAUCUUUUUAAUUAUGCAUGAUAUGAAAAAUAUGCUCAAAUCAC ((.(((((.((...((((((((((((((((((((((((((.((((((.(((.........))).)))))).))))))))))))))))))))))))))..)).))))).)). (-38.00) .......AUCAACCUUUUUUAUAUCAUGCAU................................................................................ 1 24 2 ........UCAACCUUUUUUAUAUCAUGCAUA............................................................................... 3 24 2 ...............UUUUUAUAUCAUGCAUAAUUA........................................................................... 14 21 3 ................UUUUAUAUCAUGCAUAAUUAA.......................................................................... 44 21 3 ................UUUUAUAUCAUGCAUAAUUA........................................................................... 6 20 3 .................UUUAUAUCAUGCAUAAUUAAG......................................................................... 78 21 3 ..................UUAUAUCAUGCAUAAUUAAGA........................................................................ 3 21 3 ..................UUAUAUCAUGCAUAAUUAAG......................................................................... 4 20 3 ...................UAUAUCAUGCAUAAUUAAGA........................................................................ 1 20 3 .....................UAUCAUGCAUAAUUAAGAAAA..................................................................... 1 21 2 .....................UAUCAUGCAUAAUUAAGAAAAUA................................................................... 1 23 2 .......................................................................UUUUUAAUUAUGCAUGAUAUGAA................. 1 23 2 .......................................................................UUUUUAAUUAUGCAUGAUAUGAAA................ 1 24 2 .......................................................................UUUUUAAUUAUGCAUGAUAUG................... 18 21 2 ........................................................................UUUUAAUUAUGCAUGAUAUGA.................. 6 21 2 ..........................................................................UUAAUUAUGCAUGAUAUGAAAAAU............. 3 24 2 ..........................................................................UUAAUUAUGCAUGAUAUGAAA................ 9 21 2 ...........................................................................UAAUUAUGCAUGAUAUGAAAAAUA............ 1 24 2 ...........................................................................UAAUUAUGCAUGAUAUGAAA................ 2 20 2 ...........................................................................UAAUUAUGCAUGAUAUGAAAAAU............. 3 23 2 ...........................................................................UAAUUAUGCAUGAUAUGAAAA............... 35 21 2 ............................................................................AAUUAUGCAUGAUAUGAAAA............... 1 20 8 ............................................................................AAUUAUGCAUGAUAUGAAAAAUA............ 1 23 2 ............................................................................AAUUAUGCAUGAUAUGAAAAAUAU........... 1 24 2 .............................................................................AUUAUGCAUGAUAUGAAAAAUAUG.......... 3 24 2 ................................................................................AUGCAUGAUAUGAAAAAUAUG.......... 1 21 2 ................................................................................AUGCAUGAUAUGAAAAAUAUGCUC....... 1 24 2 .......................................................................................AUAUGAAAAAUAUGCUCAAAUCAC 2 24 3 negative ACGAAACUAGUUGGAAAAAAUAU........................................................................................ 1 23 2 ACGAAACUAGUUGGAAAAAAUAUA....................................................................................... 3 24 2 .CGAAACUAGUUGGAAAAAAUAUAG...................................................................................... 1 24 2 ..GAAACUAGUUGGAAAAAAUAUAGU..................................................................................... 1 24 2 ...AAACUAGUUGGAAAAAAUAU........................................................................................ 1 20 2 .......UAGUUGGAAAAAAUAUAGUACGUA................................................................................ 2 24 2 ..........UUGGAAAAAAUAUAGUACGUAUUA............................................................................. 2 24 2 ...........UGGAAAAAAUAUAGUACGUAUUAA............................................................................ 4 24 2 ...................AUAUAGUACGUAUUAAUUCUUUUA.................................................................... 1 24 2 ....................UAUAGUACGUAUUAAUUCUUUUAU................................................................... 1 24 2 ....................UAUAGUACGUAUUAAUUCUUUU..................................................................... 1 22 2 .....................AUAGUACGUAUUAAUUCUUUUAUU.................................................................. 1 24 2 ......................UAGUACGUAUUAAUUCUUUUAUUA................................................................. 1 24 2 .......................AGUACGUAUUAAUUCUUUUAUUAA................................................................ 1 24 2 .......................AGUACGUAUUAAUUCUUUUAU................................................................... 1 21 2 ..........................................................................AAUUAAUACGUACUAUACUUU................ 1 21 2 ..........................................................................AAUUAAUACGUACUAUACUUUUUA............. 3 24 2 ...........................................................................AUUAAUACGUACUAUACUUUUUAU............ 1 24 2 ............................................................................UUAAUACGUACUAUACUUUUUAU............ 1 23 2 ............................................................................UUAAUACGUACUAUACUUUUU.............. 1 21 8 ............................................................................UUAAUACGUACUAUACUUUUUAUA........... 4 24 2 .............................................................................UAAUACGUACUAUACUUUUUAUAC.......... 1 24 2 ................................................................................UACGUACUAUACUUUUUAUACGAG....... 1 24 2 ................................................................................UACGUACUAUACUUUUUAU............ 1 19 2 ......................................................................................CUAUACUUUUUAUACGAGUUUAGU. 2 24 3 .........................................................................................UACUUUUUAUACGAGUUUAGU. 2 21 3 >scaffold07240_11314_11420_-_novel-38 AUUUAGAGGGAUUGGGGUUUCUUGUCGCUGGAGAAAUGGCACUAGCUACCAGCUGCUAGCUAGAGCCAUCCUCCAGCAACAAGACACCCUACAACUCCUCUGCUGCU ...((((((..(((((((.((((((.(((((((..(((((.(((((((.(....).))))))).))))).))))))).)))))).))))..)))..))))))..... (-57.10) ..........AUUGGGGUUUCUUGUCGCUGG............................................................................ 1 21 1 .....................UUGUCGCUGGAGAAAUGGCACU................................................................ 1 22 1 .....................UUGUCGCUGGAGAAAUGGCACUAGC............................................................. 1 25 1 .....................UUGUCGCUGGAGAAAUGGCAC................................................................. 15 21 1 ......................UGUCGCUGGAGAAAUGGCA.................................................................. 1 19 1 ......................UGUCGCUGGAGAAAUGGCAC................................................................. 1 20 1 ......................UGUCGCUGGAGAAAUGGCACUAGCU............................................................ 2 25 1 ......................UGUCGCUGGAGAAAUGGCACUA............................................................... 67 22 1 ......................UGUCGCUGGAGAAAUGGCACU................................................................ 7 21 1 .......................GUCGCUGGAGAAAUGGCACUA............................................................... 4 21 1 ..............................................................GAGCCAUCCUCCAGCAACAAG........................ 1 21 1 negative >scaffold07290_137355_137549_+_novel-39 UUAGUCAAAUUUGCCCCUGAACUAUCAUUAAAAGGCCAAAUAAAACCAUCACUUGUAAAGAUUUAAGAGUGUGAGCGAUGCUCUUUUCAAUCUAUUGUAAGGAUUAAGAGUGAGCUAUGCUCUUUUCAAUCUAUUUAGCUUUAUUUGAGUUUAUUUGGCCUUUUAAUGAUAGUAUAGGGGUAAAUUUAUACCGAA ......(((((((((((((.((((((((((((((((((((((((....(((...((((((.....(((.((.(((((..((((((((.(((((.......))))).)))).))))..)))))....)).)))......)))))).))).)))))))))))))))))))))))).)))))))))))))........ (-78.10) .............CCCCUGAACUAUCAUUAAAAG................................................................................................................................................................. 1 21 2 ..............CCCUGAACUAUCAUUAAAAGGCC.............................................................................................................................................................. 2 23 2 ..............CCCUGAACUAUCAUUAAAAGGCCA............................................................................................................................................................. 4 24 2 ...............CCUGAACUAUCAUUAAAAGGC............................................................................................................................................................... 1 21 2 ...............CCUGAACUAUCAUUAAAAGGCCA............................................................................................................................................................. 1 23 2 ................CUGAACUAUCAUUAAAAGGCC.............................................................................................................................................................. 3 21 2 ...........................................................................................................................................................UGGCCUUUUAAUGAUAGUAUA................... 1 21 1 ................................................................................................................................................................UUUUAAUGAUAGUAUAGGGGU.............. 12 21 1 .................................................................................................................................................................UUUAAUGAUAGUAUAGGGGUA............. 4 21 1 ......................................................................................................................................................................UGAUAGUAUAGGGGUAAAUUUA....... 1 22 1 ......................................................................................................................................................................UGAUAGUAUAGGGGUAAAUUU........ 3 21 1 negative ..........AACGGGGACUUGAUAGUAAUU.................................................................................................................................................................... 1 21 3 >scaffold07996_160667_160818_-_novel-40 UGGGAGGAAAUGGAGAGGGAGUUAGGAUUAUCGGAAGGUUAUGGGUGGGUGAGUGGAUAAGAUGACUAAUUGAUUGAUUUUCAUGGUUAGUAUUAUCUUACCCACACCACCCAUUCCAUAGGUUUCCGAUUAUUCCUCCCUCUCCUCGUCGC ...((.((...((((((((((...((((.((((((((.(((((((((((((.((((.((((((((((((((((.......)))..))))))..))))))).))))..)))))).))))))).)))))))).)))))))))))))))).)).. (-73.20) UGGGAGGAAAUGGAGAGGGA.................................................................................................................................... 1 20 1 ............GAGAGGGAGUUAGGAUUAUCG....................................................................................................................... 1 21 1 ............GAGAGGGAGUUAGGAUUAUCGG...................................................................................................................... 1 22 1 ............GAGAGGGAGUUAGGAUUAUCGGAA.................................................................................................................... 223 24 1 ............GAGAGGGAGUUAGGAUUAUCGGA..................................................................................................................... 9 23 1 .............AGAGGGAGUUAGGAUUAUCGG...................................................................................................................... 1 21 1 .............AGAGGGAGUUAGGAUUAUCGGAA.................................................................................................................... 19 23 1 .............AGAGGGAGUUAGGAUUAUCGGA..................................................................................................................... 2 22 1 .............AGAGGGAGUUAGGAUUAUCGGAAGG.................................................................................................................. 5 25 1 .............AGAGGGAGUUAGGAUUAUCGGAAG................................................................................................................... 6 24 1 ..............GAGGGAGUUAGGAUUAUCGGAA.................................................................................................................... 1 22 1 ..............GAGGGAGUUAGGAUUAUCGGA..................................................................................................................... 2 21 1 ..............GAGGGAGUUAGGAUUAUCGGAAGG.................................................................................................................. 4 24 1 ...............AGGGAGUUAGGAUUAUCGGA..................................................................................................................... 1 20 1 ................GGGAGUUAGGAUUAUCGGAAGGUUA............................................................................................................... 3 25 1 .................GGAGUUAGGAUUAUCGGAAGGUUAUGG............................................................................................................ 1 27 1 ..................GAGUUAGGAUUAUCGGAAGGU................................................................................................................. 1 21 1 ..................GAGUUAGGAUUAUCGGAAGGUUAUG............................................................................................................. 1 25 1 ..................GAGUUAGGAUUAUCGGAAGGUUA............................................................................................................... 21 23 1 ..................GAGUUAGGAUUAUCGGAAGGUUAUGG............................................................................................................ 4 26 1 ..................GAGUUAGGAUUAUCGGAAGGUUAU.............................................................................................................. 40 24 1 ...................AGUUAGGAUUAUCGGAA.................................................................................................................... 1 17 2 ...................AGUUAGGAUUAUCGGAAGGUUAUGG............................................................................................................ 1489 25 1 ...................AGUUAGGAUUAUCGGAAGGUUAUG............................................................................................................. 257 24 1 ...................AGUUAGGAUUAUCGGAAGGUU................................................................................................................ 3 21 1 ...................AGUUAGGAUUAUCGGAAGGUUAUGGG........................................................................................................... 3 26 1 ...................AGUUAGGAUUAUCGGAAGGUUAU.............................................................................................................. 42 23 1 ...................AGUUAGGAUUAUCGGAAGGUUA............................................................................................................... 7 22 1 ....................GUUAGGAUUAUCGGAAGGUUAUGG............................................................................................................ 11 24 1 ....................GUUAGGAUUAUCGGAAGGUUAUG............................................................................................................. 2 23 1 .....................UUAGGAUUAUCGGAAGGUUAUGG............................................................................................................ 1 23 1 .....................UUAGGAUUAUCGGAAGGUUAUGGG........................................................................................................... 1 24 1 ......................UAGGAUUAUCGGAAGGUUAU.............................................................................................................. 1 20 1 ..................................AAGGUUAUGGGUGGGUGAGUG................................................................................................. 1 21 1 ...................................AGGUUAUGGGUGGGUGAGUGGAUA............................................................................................. 3 24 1 .....................................GUUAUGGGUGGGUGAGUGGAUA............................................................................................. 2 22 1 ......................................UUAUGGGUGGGUGAGUGGAUA............................................................................................. 1 21 1 ......................................UUAUGGGUGGGUGAGUGGAU.............................................................................................. 15 20 1 .......................................UAUGGGUGGGUGAGUGGAUA............................................................................................. 1 20 1 .........................................UGGGUGGGUGAGUGGAUAA............................................................................................ 1 19 2 .........................................UGGGUGGGUGAGUGGAUAAGA.......................................................................................... 129 21 1 .........................................UGGGUGGGUGAGUGGAUAAGAU......................................................................................... 2 22 1 .........................................UGGGUGGGUGAGUGGAUAAGAUG........................................................................................ 3 23 1 .........................................UGGGUGGGUGAGUGGAUAAG........................................................................................... 5 20 1 ..........................................GGGUGGGUGAGUGGAUAAG........................................................................................... 1 19 1 ..........................................GGGUGGGUGAGUGGAUAAGA.......................................................................................... 29 20 1 ..........................................GGGUGGGUGAGUGGAUAAGAU......................................................................................... 3 21 1 ...........................................GGUGGGUGAGUGGAUAAGA.......................................................................................... 1 19 1 ............................................GUGGGUGAGUGGAUAAG........................................................................................... 1 17 2 ............................................GUGGGUGAGUGGAUAAGAUGACUA.................................................................................... 1 24 1 ............................................GUGGGUGAGUGGAUAAGAUGACUAA................................................................................... 1 25 1 ............................................GUGGGUGAGUGGAUAAGAUGACUAAUUGA............................................................................... 1 29 1 ............................................GUGGGUGAGUGGAUAAGAUGAC...................................................................................... 2 22 1 ............................................GUGGGUGAGUGGAUAAGAUG........................................................................................ 341 20 1 ............................................GUGGGUGAGUGGAUAAGAU......................................................................................... 4 19 1 ............................................GUGGGUGAGUGGAUAAGA.......................................................................................... 5 18 2 ............................................GUGGGUGAGUGGAUAAGAUGA....................................................................................... 83 21 1 ...............................................................................................UCUUACCCACACCACCCAUUCC................................... 16 22 1 ................................................................................................CUUACCCACACCACCCAUUCC................................... 1 21 1 .................................................................................................UUACCCACACCACCCAUUCC................................... 4 20 1 .................................................................................................UUACCCACACCACCCAUUCCAUA................................ 58 23 1 .................................................................................................UUACCCACACCACCCAUUCCAU................................. 6 22 1 ..................................................................................................UACCCACACCACCCAUUCCAU................................. 1 21 1 ..................................................................................................UACCCACACCACCCAUUCCAUA................................ 2 22 1 .....................................................................................................................AUAGGUUUCCGAUUAUUCCU............... 1 20 1 .....................................................................................................................AUAGGUUUCCGAUUAUUCCUC.............. 2 21 1 .....................................................................................................................AUAGGUUUCCGAUUAUUCCUCC............. 5 22 1 .......................................................................................................................AGGUUUCCGAUUAUUCCUCCC............ 1 21 2 negative ...........................................................................................................................AAGGCUAAUAAGGAGGGAGAG........ 1 21 2 >scaffold08542_27109_27229_-_novel-44 CCUUUCCAGGCAAGGAAAGCUUUUCUUGACUGGAGCAAGAGUUCUUUCCUCCCAAUCUUCUGGUGGAUUAUUGCCGCUUUCCUCCUCUCCAGGCAAGGAAAGCUUUUCUUGACUGGAGCGA .(.((((((.((((((((((((((((((.((((((...(((.......)))..........((.(((............))).)).)))))).)))))))))))))))))).)))))).). (-50.30) ....UCCAGGCAAGGAAAGCUUUUC................................................................................................ 27 21 2 ......CAGGCAAGGAAAGCUUUUC................................................................................................ 1 19 3 ...............AAAGCUUUUCUUGACUGGAGC..................................................................................... 5 21 2 ................AAGCUUUUCUUGACUGGAGCA.................................................................................... 19 21 1 ................AAGCUUUUCUUGACUGGAGC..................................................................................... 9 20 2 .......................................................................................UCCAGGCAAGGAAAGCUUUUC............. 27 21 2 .........................................................................................CAGGCAAGGAAAGCUUUUC............. 1 19 3 ..................................................................................................AAAGCUUUUCUUGACUGGAGC.. 5 21 2 ...................................................................................................AAGCUUUUCUUGACUGGAGC.. 9 20 2 negative >scaffold10241_178034_178193_+_novel-50 AAGUGCGAGAAUAUCCAGUAAUAGGUUGCCUAGCAACUUCUCAAGCUUCUCGAAACAGCCCUCAAUUUUCAGAAUAAUAAUGAGCUGAAAUUGAGGGCUGUUUCCAGAAGCUUGAGAAGUUGCUAUGCACCGUAUCACUCAAGGCUAAUCCACACCAUUU ..(((.(.((.((.(((((.((((((.((.((((((((((((((((((((.(((((((((((((((((.(((..((....))..)))))))))))))))))))).)))))))))))))))))))).))))).))).)))...)).)).))).)))..... (-80.70) ............................CCUAGCAACUUCUCAAGCUUC............................................................................................................... 1 21 2 .....................................UUCUCAAGCUUCUCGAAACAG...................................................................................................... 2 21 2 ......................................UCUCAAGCUUCUCGAAACAGCCC................................................................................................... 1 23 2 ......................................UCUCAAGCUUCUCGAAACAGC..................................................................................................... 3 21 2 .......................................CUCAAGCUUCUCGAAACAGCC.................................................................................................... 4 21 2 ........................................UCAAGCUUCUCGAAACAGCC.................................................................................................... 2 20 2 ........................................UCAAGCUUCUCGAAACAGCCC................................................................................................... 9 21 2 .........................................CAAGCUUCUCGAAACAGC..................................................................................................... 1 18 2 .........................................CAAGCUUCUCGAAACAGCCCU.................................................................................................. 6 21 2 ..........................................AAGCUUCUCGAAACAGCC.................................................................................................... 1 18 2 ..........................................AAGCUUCUCGAAACAGCCCU.................................................................................................. 1 20 2 ..............................................UUCUCGAAACAGCCCUCAAUU............................................................................................. 1 21 2 ......................................................................................GAAAUUGAGGGCUGUUUCCAGAAG.................................................. 25 24 1 .......................................................................................AAAUUGAGGGCUGUUUCC....................................................... 1 18 2 .......................................................................................AAAUUGAGGGCUGUUUCCAGAA................................................... 1 22 2 .......................................................................................AAAUUGAGGGCUGUUUCCAGAAGC................................................. 11 24 2 .......................................................................................AAAUUGAGGGCUGUUUCCAGAAG.................................................. 2 23 2 .......................................................................................AAAUUGAGGGCUGUUUCCAGA.................................................... 27 21 2 ........................................................................................AAUUGAGGGCUGUUUCCAGA.................................................... 1 20 2 ........................................................................................AAUUGAGGGCUGUUUCCAGAA................................................... 3 21 2 .........................................................................................AUUGAGGGCUGUUUCCAGAAG.................................................. 3 21 2 ..........................................................................................UUGAGGGCUGUUUCCAGAA................................................... 1 19 2 ..........................................................................................UUGAGGGCUGUUUCCAGAAGCUUGA............................................. 1 25 2 ..........................................................................................UUGAGGGCUGUUUCCAGAAGC................................................. 197 21 2 ..........................................................................................UUGAGGGCUGUUUCCAGAAG.................................................. 3 20 2 ...........................................................................................UGAGGGCUGUUUCCAGAAGCU................................................ 10 21 2 ...........................................................................................UGAGGGCUGUUUCCAGAAGC................................................. 5 20 2 ............................................................................................GAGGGCUGUUUCCAGAAGC................................................. 1 19 2 .............................................................................................AGGGCUGUUUCCAGAAGCUUG.............................................. 19 21 2 .............................................................................................AGGGCUGUUUCCAGAAGCUUGA............................................. 4 22 2 ................................................................................................GCUGUUUCCAGAAGCUUGAGAAGU........................................ 1 24 2 .................................................................................................CUGUUUCCAGAAGCUUGAGAA.......................................... 8 21 2 ..................................................................................................UGUUUCCAGAAGCUUGAGAAG......................................... 11 21 2 ......................................................................................................UCCAGAAGCUUGAGAAGUUGC..................................... 4 21 2 negative .................................GUUGAAGAGUUCGAAGAGCUU.......................................................................................................... 1 21 2 ....................................GAAGAGUUCGAAGAGCUUUGU....................................................................................................... 1 21 2 ............................................CGAAGAGCUUUGUCGGGAGUU............................................................................................... 2 21 2 .............................................................................................UCCCGACAAAGGUCUUCGAAC.............................................. 1 21 2 >scaffold12301_237927_238086_+_novel-51 GCGUCCCCUUCUUUCAUGUGUACGUCGAGUUCUAUAUGGUCUGCGGUUACCACUUGUACCAUCACCUUCAGGAGCAGCAGGAUUAAUAUUUAGAUACAAGUGGUGAAGGUACAAGUGGUGACCGCAGACCAUAUAGAACUCGACGUCCACAUGAAAUAAG .......(((.(((((((((.(((((((((((((((((((((((((((((((((((((((.(((((...........(..(((....)))..)........))))).))))))))))))))))))))))))))))))))))))))).))))))))).))) (-97.91) ...UCCCCUUCUUUCAUGUGUACGUCG..................................................................................................................................... 2 24 9 ....CCCCUUCUUUCAUGUGUACGUCGA.................................................................................................................................... 1 24 9 .....CCCUUCUUUCAUGUGUACGUCGA.................................................................................................................................... 1 23 10 .....CCCUUCUUUCAUGUGUACGUCGAG................................................................................................................................... 1 24 10 ......CCUUCUUUCAUGUGUACGUCG..................................................................................................................................... 1 21 11 ......CCUUCUUUCAUGUGUACGUCGA.................................................................................................................................... 4 22 11 ......CCUUCUUUCAUGUGUACGUCGAGU.................................................................................................................................. 7 24 11 .......CUUCUUUCAUGUGUACGUCGA.................................................................................................................................... 1 21 11 ........UUCUUUCAUGUGUACGUCGAGUUC................................................................................................................................ 14 24 10 ........UUCUUUCAUGUGUACGUCGAGU.................................................................................................................................. 18 22 12 ........UUCUUUCAUGUGUACGUCGAGUU................................................................................................................................. 2 23 12 ........UUCUUUCAUGUGUACGUCGAG................................................................................................................................... 7 21 12 .........UCUUUCAUGUGUACGUCGAGUU................................................................................................................................. 19 22 12 .........UCUUUCAUGUGUACGUCGAG................................................................................................................................... 2 20 12 .........UCUUUCAUGUGUACGUCGAGUUC................................................................................................................................ 2 23 10 .........UCUUUCAUGUGUACGUCGAGUUCU............................................................................................................................... 2 24 10 .........UCUUUCAUGUGUACGUCGAGU.................................................................................................................................. 46 21 12 ..........CUUUCAUGUGUACGUCGAGU.................................................................................................................................. 1 20 12 ..........CUUUCAUGUGUACGUCGAGUUCU............................................................................................................................... 1 23 10 ..........CUUUCAUGUGUACGUCGAGUUC................................................................................................................................ 2 22 10 ..........CUUUCAUGUGUACGUCGAGUU................................................................................................................................. 7 21 12 ...........UUUCAUGUGUACGUCGAGUU................................................................................................................................. 1 20 14 ...........UUUCAUGUGUACGUCGAGUUCUA.............................................................................................................................. 1 23 11 ...........UUUCAUGUGUACGUCGAGUUC................................................................................................................................ 17 21 11 ............UUCAUGUGUACGUCGAGUUCUAUA............................................................................................................................ 1 24 13 ............UUCAUGUGUACGUCGAGUUC................................................................................................................................ 2 20 14 ............UUCAUGUGUACGUCGAGUUCUA.............................................................................................................................. 2 22 14 ............UUCAUGUGUACGUCGAGUUCU............................................................................................................................... 6 21 14 .............UCAUGUGUACGUCGAGUUC................................................................................................................................ 1 19 14 .............UCAUGUGUACGUCGAGUUCUA.............................................................................................................................. 8 21 14 ..............CAUGUGUACGUCGAGUUCUAU............................................................................................................................. 2 21 13 ...............AUGUGUACGUCGAGUUC................................................................................................................................ 1 17 14 ................UGUGUACGUCGAGUUCUAUAUGGU........................................................................................................................ 2 24 6 ..................UGUACGUCGAGUUCUAUAUGG......................................................................................................................... 1 21 13 ...................GUACGUCGAGUUCUAUAUGGUC....................................................................................................................... 1 22 7 ....................UACGUCGAGUUCUAUAUGGUC....................................................................................................................... 10 21 7 ........................UCGAGUUCUAUAUGGUCUGCGGU................................................................................................................. 1 23 4 ........................UCGAGUUCUAUAUGGUCUGCGGUU................................................................................................................ 3 24 4 .........................CGAGUUCUAUAUGGUCUGCGGUU................................................................................................................ 1 23 4 .........................CGAGUUCUAUAUGGUCUGCGGU................................................................................................................. 2 22 4 .........................CGAGUUCUAUAUGGUCUGCGG.................................................................................................................. 4 21 4 ..........................GAGUUCUAUAUGGUCUGCGG.................................................................................................................. 1 20 4 ..........................GAGUUCUAUAUGGUCUGCGGU................................................................................................................. 2 21 4 ..........................GAGUUCUAUAUGGUCUGCGGUUAC.............................................................................................................. 2 24 4 ..........................GAGUUCUAUAUGGUCUGCGGUU................................................................................................................ 6 22 4 ...........................AGUUCUAUAUGGUCUGCGGUUAC.............................................................................................................. 2 23 4 ...........................AGUUCUAUAUGGUCUGCGGUUACC............................................................................................................. 25 24 4 ...........................AGUUCUAUAUGGUCUGCGGUU................................................................................................................ 4 21 4 ............................GUUCUAUAUGGUCUGCGGUUACC............................................................................................................. 3 23 4 ............................GUUCUAUAUGGUCUGCGGUUAC.............................................................................................................. 4 22 4 .............................UUCUAUAUGGUCUGCGGUUACC............................................................................................................. 23 22 4 .............................UUCUAUAUGGUCUGCGGUUAC.............................................................................................................. 7 21 4 ..............................UCUAUAUGGUCUGCGGUUA............................................................................................................... 1 19 4 ..............................UCUAUAUGGUCUGCGGUUACCACU.......................................................................................................... 1 24 4 ..............................UCUAUAUGGUCUGCGGUUACC............................................................................................................. 208 21 4 ..............................UCUAUAUGGUCUGCGGUUAC.............................................................................................................. 4 20 4 ...............................CUAUAUGGUCUGCGGUUACC............................................................................................................. 2 20 4 ...............................CUAUAUGGUCUGCGGUUACCA............................................................................................................ 20 21 4 ................................UAUAUGGUCUGCGGUUACCACU.......................................................................................................... 1 22 4 ................................UAUAUGGUCUGCGGUUACC............................................................................................................. 4 19 4 ................................UAUAUGGUCUGCGGUUACCAC........................................................................................................... 4 21 4 .................................AUAUGGUCUGCGGUUACCAC........................................................................................................... 1 20 4 .................................AUAUGGUCUGCGGUUACCACUUGU....................................................................................................... 1 24 4 .................................AUAUGGUCUGCGGUUACCACU.......................................................................................................... 3 21 4 ...................................AUGGUCUGCGGUUACCACUUG........................................................................................................ 2 21 4 ....................................UGGUCUGCGGUUACCACUUGU....................................................................................................... 1 21 4 ......................................GUCUGCGGUUACCACUUGUAC..................................................................................................... 1 21 4 ..............................................................CACCUUCAGGAGCAGCAGGAUUAA.......................................................................... 1 24 3 ..................................................................UUCAGGAGCAGCAGGAUUAAU......................................................................... 1 21 6 ..................................................................UUCAGGAGCAGCAGGAUUAAUAUU...................................................................... 1 24 6 ...................................................................................UAAUAUUUAGAUACAAGUGGUGAA..................................................... 1 24 1 .......................................................................................................UGAAGGUACAAGUGGUGACCGCAG................................. 1 24 2 .........................................................................................................AAGGUACAAGUGGUGACCGCAG................................. 1 22 3 ..............................................................................................................ACAAGUGGUGACCGCAGACCA............................. 3 21 4 ...............................................................................................................CAAGUGGUGACCGCAGACCAUAUA......................... 1 24 4 ................................................................................................................AAGUGGUGACCGCAGACCAUA........................... 1 21 4 .................................................................................................................AGUGGUGACCGCAGACCAUAU.......................... 1 21 4 .................................................................................................................AGUGGUGACCGCAGACCAUAUAGA....................... 2 24 4 ...................................................................................................................UGGUGACCGCAGACCAUAUAGAAC..................... 1 24 4 ....................................................................................................................GGUGACCGCAGACCAUAUAGAACU.................... 1 24 4 .....................................................................................................................GUGACCGCAGACCAUAUAGAA...................... 4 21 4 ......................................................................................................................UGACCGCAGACCAUAUAG........................ 1 18 4 ......................................................................................................................UGACCGCAGACCAUAUAGAA...................... 1 20 4 ......................................................................................................................UGACCGCAGACCAUAUAGA....................... 2 19 4 ......................................................................................................................UGACCGCAGACCAUAUAGAACU.................... 2 22 4 ......................................................................................................................UGACCGCAGACCAUAUAGAAC..................... 431 21 4 .......................................................................................................................GACCGCAGACCAUAUAGAAC..................... 6 20 4 ........................................................................................................................ACCGCAGACCAUAUAGAAC..................... 3 19 4 .........................................................................................................................CCGCAGACCAUAUAGAAC..................... 2 18 4 ..........................................................................................................................CGCAGACCAUAUAGAACU.................... 1 18 4 ..............................................................................................................................GACCAUAUAGAACUCGACGUCCAC.......... 1 24 6 ................................................................................................................................CCAUAUAGAACUCGACGUCCAC.......... 2 22 19 ................................................................................................................................CCAUAUAGAACUCGACGUCCA........... 4 21 21 .................................................................................................................................CAUAUAGAACUCGACGUCCAC.......... 1 21 22 .................................................................................................................................CAUAUAGAACUCGACGUCCACAUG....... 2 24 18 .................................................................................................................................CAUAUAGAACUCGACGUCCACA......... 7 22 21 ..................................................................................................................................AUAUAGAACUCGACGUCCACAU........ 1 22 23 ..................................................................................................................................AUAUAGAACUCGACGUCCACAUG....... 1 23 19 ..................................................................................................................................AUAUAGAACUCGACGUCCACA......... 3 21 23 ...................................................................................................................................UAUAGAACUCGACGUCCACAU........ 1 21 24 ...................................................................................................................................UAUAGAACUCGACGUCCACAUGAA..... 8 24 20 ....................................................................................................................................AUAGAACUCGACGUCCACAUGA...... 1 22 20 ....................................................................................................................................AUAGAACUCGACGUCCACAUGAA..... 1 23 20 ....................................................................................................................................AUAGAACUCGACGUCCACAUGAAA.... 11 24 15 .....................................................................................................................................UAGAACUCGACGUCCACAUGAAA.... 1 23 15 .....................................................................................................................................UAGAACUCGACGUCCACAUGA...... 2 21 21 .....................................................................................................................................UAGAACUCGACGUCCACAUGAA..... 4 22 21 ......................................................................................................................................AGAACUCGACGUCCACAUGA...... 1 20 21 ......................................................................................................................................AGAACUCGACGUCCACAUGAA..... 2 21 21 .........................................................................................................................................ACUCGACGUCCACAUGAAAUAA. 1 22 5 negative .GCAGGGGAAGAAAGUACA............................................................................................................................................. 1 18 17 .GCAGGGGAAGAAAGUACACAUGCA....................................................................................................................................... 1 24 9 .GCAGGGGAAGAAAGUACAC............................................................................................................................................ 4 19 17 ..CAGGGGAAGAAAGUACACAUGCAG...................................................................................................................................... 1 24 9 ......GGAAGAAAGUACACAUGCAGCUC................................................................................................................................... 1 23 11 ...........................UCAAGAUAUACCAGACGC................................................................................................................... 1 18 4 ............................CAAGAUAUACCAGACGCC.................................................................................................................. 2 18 4 ............................CAAGAUAUACCAGACGCCA................................................................................................................. 3 19 4 .............................................................AGUGGAAGUCCUCGUCGUCCUAAU........................................................................... 1 24 3 ...................................................................................................................ACCACUGGCGUCUGGUAUAUCUUG..................... 1 24 4 ....................................................................................................................CCACUGGCGUCUGGUAUAUCU....................... 1 21 4 ....................................................................................................................CCACUGGCGUCUGGUAUAUCUU...................... 1 22 4 ....................................................................................................................CCACUGGCGUCUGGUAUAUCUUGA.................... 6 24 4 ......................................................................................................................ACUGGCGUCUGGUAUAUCUUGAGC.................. 1 24 4 ......................................................................................................................ACUGGCGUCUGGUAUAUCUUG..................... 1 21 4 .......................................................................................................................CUGGCGUCUGGUAUAUCUUGAGCU................. 2 24 4 ........................................................................................................................UGGCGUCUGGUAUAUCUUGAGCU................. 1 23 4 ........................................................................................................................UGGCGUCUGGUAUAUCUUGAGC.................. 2 22 4 ........................................................................................................................UGGCGUCUGGUAUAUCUUGAG................... 2 21 4 .........................................................................................................................GGCGUCUGGUAUAUCUUGAG................... 1 20 4 .........................................................................................................................GGCGUCUGGUAUAUCUUGAGC.................. 4 21 4 ................................................................................................................................GGUAUAUCUUGAGCUGCAGGU........... 3 21 21 .................................................................................................................................GUAUAUCUUGAGCUGCAGGUGU......... 1 22 21 ..................................................................................................................................UAUAUCUUGAGCUGCAGGU........... 1 19 27 ...................................................................................................................................AUAUCUUGAGCUGCAGGUGUAC....... 5 22 20 ....................................................................................................................................UAUCUUGAGCUGCAGGUGUAC....... 2 21 20 .....................................................................................................................................AUCUUGAGCUGCAGGUGUACU...... 2 21 21 .....................................................................................................................................AUCUUGAGCUGCAGGUGUACUU..... 2 22 21 ......................................................................................................................................UCUUGAGCUGCAGGUGUA........ 1 18 25 .......................................................................................................................................CUUGAGCUGCAGGUGUAC....... 1 18 21 .......................................................................................................................................CUUGAGCUGCAGGUGUACUU..... 2 20 21 .......................................................................................................................................CUUGAGCUGCAGGUGUACUUU.... 7 21 15 ........................................................................................................................................UUGAGCUGCAGGUGUACUUU.... 3 20 18 .........................................................................................................................................UGAGCUGCAGGUGUACUUU.... 1 19 18 ..........................................................................................................................................GAGCUGCAGGUGUACUUU.... 1 18 18 >scaffold04043_391309_391458_-_novel-52 AGAUAGAGAGCUACUGGAAGUUGUAGGAAUGGGCGGUUUGGGAAAAAAUCAUAUACAUAAAUACGAUAACAGAUUACGUCGAAAAUCAAAUUAAGUGUAUACAAGUUUUCUUCCCAAUGUCGCCCAUUCCGAUGAUUUCCAGAAGCUCCU ....((.(((((.((((((((..(.((((((((((..((((((((((((..(((((((......(((....(((...)))....))).......)))))))...))))).)))))))...)))))))))).)..)))))))).))))))) (-59.32) AGAUAGAGAGCUACUGGAAGUUGUA............................................................................................................................. 1 25 1 ........AGCUACUGGAAGUUGUAGGAA......................................................................................................................... 1 21 1 .............CUGGAAGUUGUAGGAAUGGGC.................................................................................................................... 16 21 1 ..............UGGAAGUUGUAGGAAUGGGC.................................................................................................................... 1 20 1 ..............UGGAAGUUGUAGGAAUGGGCG................................................................................................................... 1 21 1 ................GAAGUUGUAGGAAUGGGCGGU................................................................................................................. 2 21 1 ................GAAGUUGUAGGAAUGGGCGGUU................................................................................................................ 2 22 1 .................AAGUUGUAGGAAUGGGCG................................................................................................................... 1 18 1 ..................AGUUGUAGGAAUGGGCGGUU................................................................................................................ 1 20 1 ..................AGUUGUAGGAAUGGGCGGUUUGG............................................................................................................. 2 23 1 ..................AGUUGUAGGAAUGGGCGGUUU............................................................................................................... 4 21 1 .......................UAGGAAUGGGCGGUUUGGGAAA......................................................................................................... 14 22 1 .......................UAGGAAUGGGCGGUUUGGGAAAA........................................................................................................ 20 23 1 .......................UAGGAAUGGGCGGUUUGGGAA.......................................................................................................... 24 21 1 .......................UAGGAAUGGGCGGUUUGGGA........................................................................................................... 7 20 1 ........................AGGAAUGGGCGGUUUGGGAAAAAA...................................................................................................... 1 24 1 ........................AGGAAUGGGCGGUUUGGGAA.......................................................................................................... 14 20 1 ........................AGGAAUGGGCGGUUUGGGAAA......................................................................................................... 219 21 1 ........................AGGAAUGGGCGGUUUGGGAAAA........................................................................................................ 244 22 1 ........................AGGAAUGGGCGGUUUGGGAAAAA....................................................................................................... 3 23 1 .........................GGAAUGGGCGGUUUGGGAAAA........................................................................................................ 22241 21 1 .........................GGAAUGGGCGGUUUGGGAA.......................................................................................................... 32 19 1 .........................GGAAUGGGCGGUUUGGG............................................................................................................ 5 17 2 .........................GGAAUGGGCGGUUUGGGAAAAAA...................................................................................................... 5 23 1 .........................GGAAUGGGCGGUUUGGGAAA......................................................................................................... 6157 20 1 .........................GGAAUGGGCGGUUUGGGA........................................................................................................... 8 18 1 .........................GGAAUGGGCGGUUUGGGAAAAA....................................................................................................... 93 22 1 ..........................GAAUGGGCGGUUUGGGAAAA........................................................................................................ 1077 20 1 ..........................GAAUGGGCGGUUUGGGAAAAA....................................................................................................... 3 21 1 ..........................GAAUGGGCGGUUUGGGAAA......................................................................................................... 300 19 1 ..........................GAAUGGGCGGUUUGGGAA.......................................................................................................... 6 18 1 ...........................AAUGGGCGGUUUGGGAAAAAAU..................................................................................................... 11 22 1 ...........................AAUGGGCGGUUUGGGAAAAAA...................................................................................................... 136 21 1 ...........................AAUGGGCGGUUUGGGAAA......................................................................................................... 24 18 1 ...........................AAUGGGCGGUUUGGGAAAAA....................................................................................................... 4 20 1 ...........................AAUGGGCGGUUUGGGAAAA........................................................................................................ 45 19 1 ...........................AAUGGGCGGUUUGGGAA.......................................................................................................... 5 17 1 ............................AUGGGCGGUUUGGGAAAAAAU..................................................................................................... 2 21 1 ............................AUGGGCGGUUUGGGAAA......................................................................................................... 3 17 2 ............................AUGGGCGGUUUGGGAAAAAA...................................................................................................... 3 20 1 ............................AUGGGCGGUUUGGGAAAA........................................................................................................ 7 18 1 .............................UGGGCGGUUUGGGAAAA........................................................................................................ 7 17 2 .............................................................UACGAUAACAGAUUACGUCGA.................................................................... 1 21 1 ...................................................................AACAGAUUACGUCGAAAAUCAAAU........................................................... 1 24 1 .........................................................................................AUUAAGUGUAUACAAGUUUU......................................... 2 20 1 ............................................................................................................UCUUCCCAAUGUCGCCCAUUCC.................... 2 22 1 .............................................................................................................CUUCCCAAUGUCGCCCAUUCCGA.................. 15 23 1 ..............................................................................................................UUCCCAAUGUCGCCCAU....................... 1 17 1 ..............................................................................................................UUCCCAAUGUCGCCCAUU...................... 1 18 1 ..............................................................................................................UUCCCAAUGUCGCCCAUUCCGAU................. 1 23 1 ..............................................................................................................UUCCCAAUGUCGCCCAUUCCG................... 2 21 1 ..............................................................................................................UUCCCAAUGUCGCCCAUUCCGA.................. 830 22 1 ...............................................................................................................UCCCAAUGUCGCCCAUUCCGA.................. 50 21 1 .................................................................................................................CCAAUGUCGCCCAUUCCGA.................. 5 19 1 ...................................................................................................................AAUGUCGCCCAUUCCGA.................. 1 17 1 .......................................................................................................................UCGCCCAUUCCGAUGAUUUCCA......... 1 22 1 ...............................................................................................................................UCCGAUGAUUUCCAGAAGCUCC. 1 22 1 ...............................................................................................................................UCCGAUGAUUUCCAGAAGC.... 2 19 1 ...............................................................................................................................UCCGAUGAUUUCCAGAAGCUC.. 2 21 1 ................................................................................................................................CCGAUGAUUUCCAGAAGCUCC. 3 21 1 .................................................................................................................................CGAUGAUUUCCAGAAGCUCCU 1 21 1 negative .......................................................................................................UCAAAAGAAGGGUUACAGCGGGUA....................... 1 24 1 ............................................................................................................AGAAGGGUUACAGCGGGUAAGG.................... 1 22 1 .....................................................................................................................ACAGCGGGUAAGGCUAC................ 1 17 2 >scaffold03264_387326_387485_-_novel-53 AUUUGGGUUGGUGUGAUAGGGAAAAGGAAGAUGGAGGGCAUGAAAUUUCUGGUAGUGGGCGGCUUGGUGAAGGUAAUUUCUCUGAUUUUCUUACCAACUCCGCCCAUUCCGGUGAUUUCCUGCGUUUCCCCCCUUUCCCUUCUCUCCUCUUCUCCAACUA .....((((((.(.((.((((((..(((((..((((((((.((((((.((((.(((((((((.(((((((.((.((((.....)))).)))))))))..))))))))))))).)))))).))).)))))...)))))..))))))..))..).)))))). (-64.30) ...................GGAAAAGGAAGAUGGAGGGCAUGA..................................................................................................................... 1 24 1 ....................GAAAAGGAAGAUGGAGGGCAUGA..................................................................................................................... 1 23 1 .....................AAAAGGAAGAUGGAGGGCA........................................................................................................................ 1 19 1 .....................AAAAGGAAGAUGGAGGGCAUGA..................................................................................................................... 106 22 1 .....................AAAAGGAAGAUGGAGGGCAUG...................................................................................................................... 13 21 1 .....................AAAAGGAAGAUGGAGGGCAUGAA.................................................................................................................... 3 23 1 .....................AAAAGGAAGAUGGAGGGCAU....................................................................................................................... 4 20 1 ......................AAAGGAAGAUGGAGGGCAUGA..................................................................................................................... 2 21 1 ...........................AAGAUGGAGGGCAUGAAAUUUC............................................................................................................... 1 22 1 ...........................AAGAUGGAGGGCAUGAAAUUUCU.............................................................................................................. 4 23 1 ........................................UGAAAUUUCUGGUAGUGGGCGG.................................................................................................. 9 22 1 ...........................................AAUUUCUGGUAGUGGGCGGCUU............................................................................................... 41 22 1 ............................................AUUUCUGGUAGUGGGCGGCUU............................................................................................... 1 21 1 ..................................................GGUAGUGGGCGGCUUGGUGAAGG....................................................................................... 18 23 1 ..................................................GGUAGUGGGCGGCUUGGUGAAG........................................................................................ 4 22 1 ............................................................................UUUCUCUGAUUUUCUUACCAACU............................................................. 1 23 1 ..........................................................................................UUACCAACUCCGCCCAUUCCGG................................................ 3 22 1 negative >scaffold03581_762705_762813_-_novel-54 UAAGAAUGGCAGCCAUUGUUCACUCUCCCUAAAGGCUUCAACCAAUUUGUGGACUACACAAAGCUUGAUGCCUUAAGGGAGAGUGGAUAAAAGCUGUCAUGAUUUUUGC .....((((((((..(((((((((((((((.(((((.((((....((((((.....))))))..)))).))))).)))))))))))))))..))))))))......... (-55.50) .............CAUUGUUCACUCUCCCUAAA............................................................................ 1 20 1 .............CAUUGUUCACUCUCCCUAAAG........................................................................... 3 21 1 ..................UUCACUCUCCCUAAAGGCUUC...................................................................... 3 21 1 ...................UCACUCUCCCUAAAGGCUUC...................................................................... 2 20 1 ....................CACUCUCCCUAAAGGCUUCAAC................................................................... 7 22 1 .....................ACUCUCCCUAAAGGCUU....................................................................... 1 17 1 .....................ACUCUCCCUAAAGGCUUC...................................................................... 1 18 1 .....................ACUCUCCCUAAAGGCUUCAACC.................................................................. 2 22 1 .....................ACUCUCCCUAAAGGCUUCAA.................................................................... 29 20 1 .....................ACUCUCCCUAAAGGCUUCAAC................................................................... 3684 21 1 .....................ACUCUCCCUAAAGGCUUCA..................................................................... 4 19 1 ......................CUCUCCCUAAAGGCUUCAA.................................................................... 1 19 1 ......................CUCUCCCUAAAGGCUUCAAC................................................................... 116 20 1 ......................CUCUCCCUAAAGGCUUCAACC.................................................................. 2 21 1 .......................UCUCCCUAAAGGCUUCAAC................................................................... 7 19 1 ........................CUCCCUAAAGGCUUCAAC................................................................... 3 18 1 .........................UCCCUAAAGGCUUCAAC................................................................... 5 17 1 ................................AGGCUUCAACCAAUUUGUGGACUA..................................................... 1 24 1 ................................................GUGGACUACACAAAGCUUGAUGCC..................................... 1 24 1 ..............................................................GCUUGAUGCCUUAAGGGAGAGUGG....................... 1 24 1 ...............................................................CUUGAUGCCUUAAGGGAGAGU......................... 3 21 1 ................................................................UUGAUGCCUUAAGGGAGAGUGG....................... 2 22 1 .................................................................UGAUGCCUUAAGGGAGA........................... 1 17 2 .................................................................UGAUGCCUUAAGGGAGAGUGGA...................... 10 22 1 .................................................................UGAUGCCUUAAGGGAGAGUGG....................... 2528 21 1 .................................................................UGAUGCCUUAAGGGAGAG.......................... 3 18 1 .................................................................UGAUGCCUUAAGGGAGAGU......................... 5 19 1 .................................................................UGAUGCCUUAAGGGAGAGUG........................ 8 20 1 ..................................................................GAUGCCUUAAGGGAGAGUGG....................... 82 20 1 ...................................................................AUGCCUUAAGGGAGAGUGG....................... 1 19 1 ....................................................................UGCCUUAAGGGAGAGUGGAUA.................... 15 21 1 .....................................................................GCCUUAAGGGAGAGUGGAUA.................... 1 20 1 ......................................................................CCUUAAGGGAGAGUGGAUAAA.................. 2 21 1 .......................................................................CUUAAGGGAGAGUGGAUAA................... 1 19 1 .......................................................................CUUAAGGGAGAGUGGAUAAAAG................ 1 22 1 .......................................................................CUUAAGGGAGAGUGGAUAAA.................. 14 20 1 .......................................................................CUUAAGGGAGAGUGGAUAAAAGC............... 4 23 1 .......................................................................CUUAAGGGAGAGUGGAUAAAA................. 48 21 1 ........................................................................UUAAGGGAGAGUGGAUAAAAGCU.............. 1 23 1 ........................................................................UUAAGGGAGAGUGGAUAAA.................. 2 19 1 ........................................................................UUAAGGGAGAGUGGAUAAAAGC............... 311 22 1 ........................................................................UUAAGGGAGAGUGGAUAAAA................. 5 20 1 ........................................................................UUAAGGGAGAGUGGAUAAAAG................ 61 21 1 .........................................................................UAAGGGAGAGUGGAUAAA.................. 1 18 1 .........................................................................UAAGGGAGAGUGGAUAAAA................. 1 19 1 .........................................................................UAAGGGAGAGUGGAUAAAAGCU.............. 11 22 1 .........................................................................UAAGGGAGAGUGGAUAAAAGC............... 300 21 1 .........................................................................UAAGGGAGAGUGGAUAAAAG................ 7 20 1 ..........................................................................AAGGGAGAGUGGAUAAAAGC............... 13 20 1 ...........................................................................AGGGAGAGUGGAUAAAAGC............... 1 19 1 ...........................................................................AGGGAGAGUGGAUAAAAGCUGUC........... 1 23 1 ...........................................................................AGGGAGAGUGGAUAAAAGCUGUCA.......... 3 24 1 ............................................................................GGGAGAGUGGAUAAAAGCUGUCA.......... 1 23 1 .................................................................................AGUGGAUAAAAGCUGUCAUG........ 1 20 1 .................................................................................AGUGGAUAAAAGCUGUCAUGA....... 2 21 1 negative >scaffold03604_533082_533222_-_novel-55 GGGAAAGGGAGAGGGGUUGCUGGGAGCUAUGGGUAUGGGGGGAUUGGGCAAAAUUGCUUGGCUUUGUUUAUUAGCAGAGGCUAAAGCUGAUUUUUCCCAAGACCUCCCAUACCAGUGGCCUCCAGCUGUUUCCUCCCCUUC ....(((((.((((((..(((((..(((((.(((((((((((.(((((.(((((((((((((((((((....)))))).))).)))).)))))).)))))..))))))))))).)))))..)))))...))))))))))). (-79.00) ...AAAGGGAGAGGGGUUGCUGGG..................................................................................................................... 1 21 1 ....AAGGGAGAGGGGUUGCUGGGA.................................................................................................................... 1 21 1 .....AGGGAGAGGGGUUGCUGGGAG................................................................................................................... 1 21 1 ........GAGAGGGGUUGCUGGGAG................................................................................................................... 1 18 1 ........GAGAGGGGUUGCUGGGAGCUAUG.............................................................................................................. 10 23 1 ........GAGAGGGGUUGCUGGGAGCUAUGG............................................................................................................. 3 24 1 ........GAGAGGGGUUGCUGGGAGCUAUGGG............................................................................................................ 5 25 1 ........GAGAGGGGUUGCUGGGAGCUAU............................................................................................................... 9 22 1 .........AGAGGGGUUGCUGGGAGCUAUGGG............................................................................................................ 4 24 1 ...................CUGGGAGCUAUGGGUAUGGGG..................................................................................................... 1 21 1 ............................AUGGGUAUGGGGGGAUUGGG............................................................................................. 1 20 1 .............................UGGGUAUGGGGGGAUUGGGCAA.......................................................................................... 1 22 1 .............................UGGGUAUGGGGGGAUUGGGCAAAAUU...................................................................................... 1 26 1 .............................UGGGUAUGGGGGGAUUGGGC............................................................................................ 2 20 1 .............................UGGGUAUGGGGGGAUUGGGCAAAAU....................................................................................... 2 25 1 .............................UGGGUAUGGGGGGAUUGGGCA........................................................................................... 23 21 1 .............................UGGGUAUGGGGGGAUUGGGCAAAA........................................................................................ 5 24 1 ..............................GGGUAUGGGGGGAUUGGGC............................................................................................ 1 19 1 ..............................GGGUAUGGGGGGAUUGGGCA........................................................................................... 1 20 1 ...............................GGUAUGGGGGGAUUGGGCAAA......................................................................................... 129 21 1 ...............................GGUAUGGGGGGAUUGGGCAAAAU....................................................................................... 2 23 1 ...............................GGUAUGGGGGGAUUGGGCA........................................................................................... 20 19 1 ...............................GGUAUGGGGGGAUUGGGC............................................................................................ 4 18 1 ...............................GGUAUGGGGGGAUUGGGCAA.......................................................................................... 84 20 1 ...............................GGUAUGGGGGGAUUGGGCAAAA........................................................................................ 9 22 1 ................................GUAUGGGGGGAUUGGGCA........................................................................................... 1 18 1 ................................GUAUGGGGGGAUUGGGCAAA......................................................................................... 21 20 1 ................................GUAUGGGGGGAUUGGGCAAAA........................................................................................ 21 21 1 ................................GUAUGGGGGGAUUGGGCAA.......................................................................................... 5 19 1 ................................GUAUGGGGGGAUUGGGCAAAAU....................................................................................... 5 22 1 .................................UAUGGGGGGAUUGGGCAAAAUUG..................................................................................... 11 23 1 .................................UAUGGGGGGAUUGGGCAAAAUUGC.................................................................................... 14 24 1 .................................UAUGGGGGGAUUGGGCA........................................................................................... 15 17 1 .................................UAUGGGGGGAUUGGGCAAA......................................................................................... 17 19 1 .................................UAUGGGGGGAUUGGGCAAAA........................................................................................ 223 20 1 .................................UAUGGGGGGAUUGGGCAAAAU....................................................................................... 35347 21 1 .................................UAUGGGGGGAUUGGGCAAAAUUGCU................................................................................... 6 25 1 .................................UAUGGGGGGAUUGGGCAA.......................................................................................... 7 18 1 .................................UAUGGGGGGAUUGGGCAAAAUU...................................................................................... 895 22 1 ..................................AUGGGGGGAUUGGGCAA.......................................................................................... 1 17 1 ..................................AUGGGGGGAUUGGGCAAAA........................................................................................ 12 19 1 ..................................AUGGGGGGAUUGGGCAAA......................................................................................... 2 18 1 ..................................AUGGGGGGAUUGGGCAAAAUUG..................................................................................... 2 22 1 ..................................AUGGGGGGAUUGGGCAAAAUUGCUU.................................................................................. 2 25 1 ..................................AUGGGGGGAUUGGGCAAAAUU...................................................................................... 226 21 1 ..................................AUGGGGGGAUUGGGCAAAAU....................................................................................... 2261 20 1 ..................................AUGGGGGGAUUGGGCAAAAUUGC.................................................................................... 67 23 1 ..................................AUGGGGGGAUUGGGCAAAAUUGCU................................................................................... 89 24 1 ...................................UGGGGGGAUUGGGCAAAA........................................................................................ 1 18 1 ...................................UGGGGGGAUUGGGCAAAAU....................................................................................... 110 19 1 ...................................UGGGGGGAUUGGGCAAAAUU...................................................................................... 2 20 1 ...................................UGGGGGGAUUGGGCAAAAUUGC.................................................................................... 2 22 1 ...................................UGGGGGGAUUGGGCAAAAUUGCU................................................................................... 2 23 1 ....................................GGGGGGAUUGGGCAAAAU....................................................................................... 5 18 1 .....................................GGGGGAUUGGGCAAAAUUGCU................................................................................... 1 21 1 .....................................GGGGGAUUGGGCAAAAU....................................................................................... 39 17 1 .....................................GGGGGAUUGGGCAAAAUU...................................................................................... 6 18 1 .......................................GGGAUUGGGCAAAAUUGC.................................................................................... 1 18 1 ..................................................................UUUAUUAGCAGAGGCUAAAGCUGAUUU................................................ 1 27 1 .......................................................................UAGCAGAGGCUAAAGCUGAUU................................................. 1 21 1 ..................................................................................AAAGCUGAUUUUUCCCAAGA....................................... 1 20 1 ........................................................................................GAUUUUUCCCAAGACCUCCCAUAC............................. 1 24 1 ...........................................................................................UUUUCCCAAGACCUCCCAU............................... 1 19 2 ...........................................................................................UUUUCCCAAGACCUCCCAUACCA........................... 2 23 1 ...........................................................................................UUUUCCCAAGACCUCCCAUAC............................. 27 21 1 ...........................................................................................UUUUCCCAAGACCUCCCAUACC............................ 276 22 1 ............................................................................................UUUCCCAAGACCUCCCAUACC............................ 11 21 1 ............................................................................................UUUCCCAAGACCUCCCAUACCA........................... 2 22 1 ............................................................................................UUUCCCAAGACCUCCCAUACCAG.......................... 2 23 1 .............................................................................................UUCCCAAGACCUCCCAUACC............................ 1 20 1 .............................................................................................UUCCCAAGACCUCCCAUACCA........................... 2 21 1 .............................................................................................UUCCCAAGACCUCCCAUACCAGU......................... 5 23 1 .............................................................................................UUCCCAAGACCUCCCAUACCAG.......................... 629 22 1 ..............................................................................................UCCCAAGACCUCCCAUACCAGU......................... 1 22 1 ..............................................................................................UCCCAAGACCUCCCAUACCAG.......................... 15 21 1 ..............................................................................................UCCCAAGACCUCCCAUACC............................ 2 19 1 ................................................................................................CCAAGACCUCCCAUACCAG.......................... 5 19 1 ........................................................................................................UCCCAUACCAGUGGCCUCCAG................ 5 21 1 .................................................................................................................AGUGGCCUCCAGCUGUUUCCUCC..... 3 23 1 .................................................................................................................AGUGGCCUCCAGCUGUUUCCUCCC.... 3 24 1 ...................................................................................................................UGGCCUCCAGCUGUUUCCU....... 1 19 1 negative .................ACGACCCUCGAUACCCAUACC....................................................................................................... 1 21 1 ......................CCUCGAUACCCAUACCCCCCU.................................................................................................. 1 21 1 ............................................ACCCGUUUUAACGAACCGAAA............................................................................ 1 21 1 ..................................................UUUAACGAACCGAAACAAAUA...................................................................... 1 21 1 ..................................................................................UUUCGACUAAAAAGGGUUCUG...................................... 1 21 1 .........................................................................................UAAAAAGGGUUCUGGAGGGUAU.............................. 1 22 1 ..............................................................................................AGGGUUCUGGAGGGUAUGGUC.......................... 1 21 1 .................................................................................................................UCACCGGAGGUCGACAAAGG........ 1 20 1 ...................................................................................................................ACCGGAGGUCGACAAAGGAG...... 1 20 1 .......................................................................................................................GAGGUCGACAAAGGAGGGGAA. 1 21 1