Journal
EBioMedicine
Publication Date
9-1-2021
Volume
71
First Page
103559
Document Type
Open Access Publication
DOI
10.1016/j.ebiom.2021.103559
Rights and Permissions
Andrews JM, Pyfrom SC, Schmidt JA, Koues OI, Kowalewski RA, Grams NR, Sun JJ, Berman LR, Duncavage EJ, Lee YS, Cashen AF, Oltz EM, Payton JE. Loss of synergistic transcriptional feedback loops drives diverse B-cell cancers. EBioMedicine. 2021 Sep;71:103559. doi: 10.1016/j.ebiom.2021.103559. © 2021 The Author(s). Published by Elsevier B.V. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/)
Recommended Citation
Andrews, Jared M; Pyfrom, Sarah C; Schmidt, Jennifer A; Koues, Olivia I; Kowalewski, Rodney A; Grams, Nicholas R; Sun, Jessica J; Berman, Leigh R; Duncavage, Eric J; Lee, Yi-Shan; Cashen, Amanda F; Oltz, Eugene M; and Payton, Jacqueline E, "Loss of synergistic transcriptional feedback loops drives diverse B-cell cancers." EBioMedicine. 71, 103559 (2021).
https://digitalcommons.wustl.edu/open_access_pubs/11314
Captions for Supplementary Material
mmc2.pdf (2301 kB)
Figure S1-S6
mmc3.xlsx (79 kB)
Supplementary Table S1 contains the TCR clonotype variable (V) and joining (J) segments and their proportions for each BCL sample and 5 healthy control B cell (tonsil) samples (RNAseq).
mmc4.docx (9724 kB)
Supplementary Table S2 contains the consensus peaks chromosome start/stop locations for each ChIPseq histone mark
mmc5.xlsx (1119 kB)
Supplementary Table S3 contains the super-enhancer differentially bound comparisons for each BCL subtype
mmc6.xlsx (9 kB)
Supplementary Table S4 contains a summary of the copy number alterations identified in each BCL sample
mmc7.xlsx (14 kB)
Supplementary Table S5 contains the transcription factors in each cluster in Figure 5A
mmc8.xlsx (9 kB)
Supplementary Table S6 contains the primers used for luciferase assays
