Journal
Nature Communications
Publication Date
2017
Volume
8
Document Type
Open Access Publication
DOI
10.1038/ncomms15451
Rights and Permissions
Adema, C. M. et al. Whole genome analysis of a schistosomiasis- transmitting freshwater snail. Nat. Commun. 8, 15451 doi: 10.1038/ncomms15451 (2017). This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ Copyright The Author(s) 2017
Recommended Citation
Hillier, LaDeana W.; Minx, Patrick; Clifton, Sandra; Fronick, Catrina; Fulton, Lucinda; Magrini, Vince; Tomlinson, Chad; Wilson, Richard K.; and et al, "Whole genome analysis of a schistosomiasis-transmitting freshwater snail." Nature Communications. 8, (2017).
https://digitalcommons.wustl.edu/open_access_pubs/5948
Supplementary Figures, Supplementary Notes and Supplementary References.
Peer Review File.pdf (208 kB)
Supplementary Data 1.xlsx (19 kB)
Sequence data sets
Supplementary Data 2.xls (666 kB)
Biomphalaria glabrata linkage groups
Supplementary Data 3.xls (12499 kB)
Proteome InterProscan annotation
Supplementary Data 4.xls (37 kB)
proteome KEGG/SNV mapping
Supplementary Data 5.xls (25 kB)
Prediction of secreted proteins
Supplementary Data 6.xls (267 kB)
fasta sequences of predicted secreted proteins (fasta)
Supplementary Data 7.xls (727 kB)
secretome B. glabrata, Interproscan annotation
Supplementary Data 8.xls (94 kB)
Pfam domain annotation of predicted secretome
Supplementary Data 9.xls (25243 kB)
Transcripts, tissue distribution
Supplementary Data 10.xls (140 kB)
Secreted_proteins SCW&ES_Topblast_results
Supplementary Data 11.xls (137 kB)
Predicted GPCR genes of Biomphalaria glabrata
Supplementary Data 12.xls (247 kB)
Mycoplasma/Mollicute annotation
Supplementary Data 13.xls (29 kB)
HSP annotation
Supplementary Data 14.xlsx (11 kB)
GREPs bind to S.mansoni
Supplementary Data 15.xls (118 kB)
HSP expression in Bge cell-line
Supplementary Data 16.xls (89 kB)
Cytochrome P 450 (CYP) genes of B. glabrata.
Supplementary Data 17.xls (36 kB)
Pattern recognition receptors (PRRs) and cytokines
Supplementary Data 18.xls (25 kB)
TLR pathway signaling
Supplementary Data 19.xls (44 kB)
Complement-like factors.
Supplementary Data 20.xls (62 kB)
Apoptosome
Supplementary Data 21.xls (51 kB)
REDOX genes
Supplementary Data 22.xls (41 kB)
Antimicrobial factors
Supplementary Data 23.xls (45 kB)
Antimicrobial factors expression profiles
Supplementary Data 24.xls (76 kB)
Annotation unknown microarray features
Supplementary Data 25.xls (53 kB)
Expression patterns of previous unknowns.
Supplementary Data 26.xls (47 kB)
Epigenetic toolbox genes
Supplementary Data 27.xls (28 kB)
miRNA and piRNA pathway factors
Supplementary Data 28.xls (76 kB)
Conserved precursor miRNAs, Structural, location and thermodynamic
Supplementary Data 29.xls (40 kB)
Conserved mature miRNAs B. glabrata and homologs
Supplementary Data 30.xls (30 kB)
conserved precursor miRNAs tissue distribution in B. glabrata
Supplementary Data 31.xls (54 kB)
Conserved miRNA target gene predictions
Supplementary Data 32.xls (125 kB)
Novel miRNAs predictions
Supplementary Data 33.xls (107 kB)
Novel predicted miRNA and target genes
Supplementary Data 34.xls (46 kB)
Neuropeptides precursors and prepropeptides
Supplementary Data 35.xls (35 kB)
neuropeptides, tissue distribution
Supplementary Data 36.xls (54 kB)
Predicted bioactive cleavage products of neuropeptides
Supplementary Data 37.xls (28 kB)
Steroidogenesis pathway genes
Supplementary Data 38.xls (35 kB)
Cardiac regulatory and structural genes in B. glabrata
Supplementary Data 39.xls (26 kB)
Biomphalaria glabrata actins
Supplementary Data 40.xls (32 kB)
Biomineralization transcripts from B. glabrata mantle tissue.
Supplementary Data 41.xls (25 kB)
Low-copy transposable elements (TE) abundance
Supplementary Data 42.xls (85 kB)
Identity of 34 B. pfeifferi and B. glabrata sequence homologs
Supplementary Data 43.xls (281 kB)
Sequence Identity of B. pfeifferi homologs to 162 B. glabrata genes from
