Journal
Elife
Publication Date
4-16-2020
Volume
9
First Page
e57519
Document Type
Open Access Publication
DOI
10.7554/eLife.57519
Rights and Permissions
Mondal B, Jin H, Kallappagoudar S, et al. The histone deacetylase complex MiDAC regulates a neurodevelopmental gene expression program to control neurite outgrowth. Elife. 2020;9:e57519. Published 2020 Apr 16. doi:10.7554/eLife.57519. © 2020, Mondal et al. This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.
Recommended Citation
Mondal, Baisakhi; Jin, Hongjian; Kallappagoudar, Satish; Sedkov, Yurii; Martinez, Tanner; Sentmanat, Monica F.; Poet, Greg J.; Li, Chunliang; Fan, Yiping; Pruett-Miller, Shondra M.; and Herz, Hans-Martin, "The histone deacetylase complex MiDAC regulates a neurodevelopmental gene expression program to control neurite outgrowth." Elife. 9, e57519 (2020).
https://digitalcommons.wustl.edu/open_access_pubs/9335
elife-57519-supp1-v3.docx (13 kB)
List of guide RNA and deep sequencing primer sequences used for CRISPR/Cas9-mediated genome editing of Dnttip1 and Elmsan1 in mESCs.
elife-57519-supp2-v3 (1).xlsx (2052 kB)
Differentially expressed genes in Dnttip1 KO (KO1 and KO2) and Elmsan1 KO (KO1 and KO2) mESCs (FC ≤−1.5 or ≥1.5; p-value<0.01) (MS Excel spreadsheets).
elife-57519-supp3-v3.xlsx (2912 kB)
DNTTIP1 binding sites identified by ChIP-seq in mESCs (MS Excel spreadsheet).
elife-57519-supp4-v3.xlsx (124 kB)
Genes that are up- or downregulated in Dnttip1 KO (KO1 and KO2) versus WT mESCs (FC ≤−1.5 or ≥1.5; p-value<0.01 except for Spry4) and bound by DNTTIP1 (MS Excel spreadsheet).
elife-57519-supp5-v3.docx (14 kB)
List of primer sequences used for qRT-PCR analysis.
elife-57519-supp6-v3.docx (15 kB)
List of primer sequences used for ChIP qPCR analysis.
Transparent Reporting form.docx (245 kB)
