Journal
Cell
Publication Date
10-31-2019
Volume
179
Issue
4
First Page
964
Last Page
983
Document Type
Open Access Publication
DOI
10.1016/j.cell.2019.10.007
Rights and Permissions
Clark DJ, Dhanasekaran SM, Petralia F, Pan J, Song X, Hu Y, da Veiga Leprevost F, Reva B, Lih TM, Chang HY, Ma W, Huang C, Ricketts CJ, Chen L, Krek A, Li Y, Rykunov D, Li QK, Chen LS, Ozbek U, Vasaikar S, Wu Y, Yoo S, Chowdhury S, Wyczalkowski MA, Ji J, Schnaubelt M, Kong A, Sethuraman S, Avtonomov DM, Ao M, Colaprico A, Cao S, Cho KC, Kalayci S, Ma S, Liu W, Ruggles K, Calinawan A, Gümüş ZH, Geiszler D, Kawaler E, Teo GC, Wen B, Zhang Y, Keegan S, Li K, Chen F, Edwards N, Pierorazio PM, Chen XS, Pavlovich CP, Hakimi AA, Brominski G, Hsieh JJ, Antczak A, Omelchenko T, Lubinski J, Wiznerowicz M, Linehan WM, Kinsinger CR, Thiagarajan M, Boja ES, Mesri M, Hiltke T, Robles AI, Rodriguez H, Qian J, Fenyö D, Zhang B, Ding L, Schadt E, Chinnaiyan AM, Zhang Z, Omenn GS, Cieslik M, Chan DW, Nesvizhskii AI, Wang P, Zhang H; Clinical Proteomic Tumor Analysis Consortium. Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma. Cell. 2019 Oct 31;179(4):964-983.e31. doi: 10.1016/j.cell.2019.10.007. Copyright 2019 Elsevier Inc.This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
Recommended Citation
Clark, David J; Li, Yize; Wu, Yige; Wyczalkowski, Matthew A; Sethuraman, Sunantha; Cao, Song; Chen, Feng; Hsieh, James J; Ding, Li; and et al, "Integrated proteogenomic characterization of clear cell renal cell carcinoma." Cell. 179, 4. 964 - 983. (2019).
https://digitalcommons.wustl.edu/open_access_pubs/9899
Erratum
1-s2.0-S0092867419311237-mmc1.xlsx (112 kB)
Table S1. ccRCC Patient Clinical Characteristics, CPTAC Data Annotation, and Genomic and Transcriptomic Sequencing Depth, Related to Figures 1, 3, 4, 5, 6, 7, S1, S3, S4, S5, and S7.
1-s2.0-S0092867419311237-mmc2.xlsx (511 kB)
Table S2. Genomic Alteration Annotation, Chromosome Translocation Events, and CpG Island Methylator Phenotype (CIMP) Analysis, Related to Figures 1 and S1.
1-s2.0-S0092867419311237-mmc3.xlsx (2535 kB)
Table S3. iProFun Results, trans-Effects, Related to Figures 2 and S2.
1-s2.0-S0092867419311237-mmc4.xlsx (1225 kB)
Table S4. mRNA and Protein Correlation, Related to Figures 3, 4, S3, and S4.
1-s2.0-S0092867419311237-mmc5.xlsx (1024 kB)
Table S5. Tumor Protein Expression Profiles, Related to Figures 4, 7, S4, and S7.
1-s2.0-S0092867419311237-mmc6.xlsx (1209 kB)
Table S6. Phosphopeptide Analysis, Related to Figures 5 and S5.
1-s2.0-S0092867419311237-mmc7.xlsx (2997 kB)
Table S7. Immune Analysis, Related to Figures 6 and S6.
