Authors

Journal

Nature Genetics

Publication Date

9-1-2022

Volume

54

Issue

9

First Page

1390

Last Page

1405

Document Type

Open Access Publication

DOI

10.1038/s41588-022-01157-1

41588_2022_1157_MOESM1_ESM.pdf (1283 kB)
Supplementary Note and Fig. 1

41588_2022_1157_MOESM2_ESM.pdf (3215 kB)
Reporting Summary

41588_2022_1157_MOESM3_ESM.xlsx (48 kB)
Supplementary Tables 1–5

41588_2022_1157_MOESM4_ESM.xlsx (31703 kB)
Bulk omics data including somatic and germline variants and proteogenomics data

41588_2022_1157_MOESM5_ESM.txt (112915 kB)
CNVkit raw copy number calls across the sample set

41588_2022_1157_MOESM6_ESM.xlsx (15 kB)
Total cell count of transitional cell populations and mutation mapping across samples

41588_2022_1157_MOESM7_ESM.xlsx (979 kB)
Differentially expressed genes (DEGs) identified by annotating spatial transcriptomics spots using the Loupe Browser and Seurat. FindAllMarkers function from Seurat was used to identify DEGs

41588_2022_1157_MOESM8_ESM.txt (7 kB)
Tumor purity estimates predicted by ABSOLUTE across sample cohort

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