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Submissions from 2012

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Vpx is critical for SIVmne infection of pigtail macaques, Michael Belshan, Jason T. Kimata, Charles Brown, Xiaogang Cheng, Anna McCulley, Alison Larsen, Rajesh Thippeshappa, Vida Hodara, Luis Giavedoni, Vanessa Hirsch, and Lee Ratner

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Warfarin and aspirin in patients with heart failure and sinus rhythm, Douglas L. Mann and et al

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Weight perceptions and perceived risk for diabetes and heart disease among overweight and obese women, Suffolk County, New York, 2008, Susan Darlow, Melody S. Goodman, Jewel D. Stafford, Christina R. Lachance, and Kimberly A. Kaphingst

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What does it take to stick around?: Molecular insights into biofilm formation by uropathogenic Escherichia coli, Maria Hadjifrangiskou and Scott J. Hultgren

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What would make getting colorectal cancer screening easier? Perspectives from screeners and nonscreeners, Gilda G. Medina, Amy McQueen, Anthony J. Greisinger, L. Kay Bartholomew, and Sally W. Vernon

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When planning results in loss of control: Intention-based reflexivity and working-memory, Nachshon Meiran, Michael W. Cole, and Todd S. Braver

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Whole-exome sequencing and an iPSC-derived cardiomyocyte model provides a powerful platform for gene discovery in left ventricular hypertrophy, D. Zhi, M. R. Irvin, C. C. Gu, A. J. Stoddard, R. Lorier, A. Matter, D. C. Rao, V Srinivasasainagendra, H. K. Tiwari, A. Turner, U. Broeckel, and D. K. Arnett

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Whole genome sequence of Treponema pallidum ssp. pallidum, strain Mexico A, suggests recombination between yaws and syphilis strains, Helena Petrosova, Maria Zobanikova, Darina Cejkova, Lenka Mikalova, Petra Pospisilova, Michal Strouhal, Lei Chen, Xiang Qin, Donna M. Muzny, George M. Weinstock, and David Smajs

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Whole genome sequences of three Treponema pallidum ssp. pertenue strains: Yaws and syphilis treponemes differ in less than 0.2% of the genome sequence, Darina Cejkova, Marie Zobanikova, Lei Chen, Petra Pospisilova, Michal Strouhal, Xiang Qin, Lenka Mikalova, Steven J. Norris, Donna M. Muzny, Richard A. Gibbs, Lucinda L. Fulton, Erica Sodergren, George M. Weinstock, and David Smajs

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Whole-genome sequencing to identify mutants and polymorphisms in Chlamydomonas reinhardtii, Susan K. Dutcher, Linya Li, Huawen Lin, Leslie Meyer, Thomas H. Giddings Jr., Alan L. Kwan, and Brian L. Lewis

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Why does Jack, and not Jill, break his crown? Sex disparity in brain tumors, Tao Sun, Nicole M. Warrington, and Joshua B. Rubin

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Wip1 and p53 contribute to HTLV-1 Tax-induced tumorigenesis, Linda Zane, Junichiro Yasunaga, Yu Mitagami, Venkat Yedavalli, Sai-Wen Tang, Chia-Yen Chen, Lee Ratner, Xiongbin Lu, and Kuan-Teh Jeang

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WldS but not Nmnat1 protects dopaminergic neurites from MPP+ neurotoxicity, Jo Ann V. Antenor-Dorsey and Karen O'Malley

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Working memory related brain network connectivity in individuals with schizophrenia and their siblings, Grega Repovs and Deanna M. Barch

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WormBase 2012: More genomes, more data, new website, Karen Yook, Tamberlyn Bieri, Bill Nash, Philip Ozersky, and John Spieth

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Ybcl of uropathogenic escherichia coli suppresses transepithelial neutrophil migration, Megan E. Lau, Jennifer A. Loughman, and David A. Hunstad

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Year in review 2011: Critical Care – neurocritical care, Salah G. Keyrouz and Michael N. Diringer

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Zbtb46 expression distinguishes classical dendritic cells and their committed progenitors from other immune lineages, Ansuman T. Satpathy, Wumesh KC, Jörn C. Albring, Brian T. Edelson, Nicole M. Kretzer, Deepta Bhattacharya, Theresa L. Murphy, and Kenneth M. Murphy

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β-cell metabolic alterations under chronic nutrient overload in rat and human islets, Stephanie Vernier, Angela Chiu, Joseph Schober, Theresa Weber, Phuong Nguyen, Mark Luer, Timothy McPherson, Paul E. Wanda, Connie A. Marshall, Nidhi Rohatgi, Michael L. McDaniel, Andrew S. Greenberg, and Guim Kwon

Submissions from 2011

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Simultaneous necrotizing soft tissue infection and colonic necrosis caused by clostridium septicum, Jennifer L. Gnerlich, Jon H. Ritter, John P. Kirby, and John E. Mazuski

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Ajuba is required for Rac activation and maintenance of E-cadherin adhesion, Sébastien Nola, Reiko Daigaku, Kasia Smolarczyk, Maryke Carstens, Belen Martin-Martin, Gregory Longmore, Maryse Bailly, and Vania M.M. Braga

Laparoscopic retroperitoneal lymph node dissection for low-stage cancer: A Washington University update, Michael W. Gardner, Timur M. Roytman, Cathy Chen, Steven B. Brandes, Adam S. Kibel, Robert L. Grubb III, Sam B. Bhayani, and Robert S. Figenshau

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Mycoplasma pneumoniae periprosthetic joint infection identified by 16S ribosomal RNA gene amplification and sequencing: A case report, Zhuolin Han, Carey-Ann D. Burnham, John Clohisy, and Hilary Babcock

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What's new in orthopaedic trauma, William M. Ricci, Christopher McAndrew, David Merriman, and Michael J. Gardner

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In vivo microdialysis reveals age-dependent decrease of brain interstitial fluid tau levels in P301S human tau transgenic mice, Kaoru Yamada, John R. Cirrito, Floy R. Stewart, Hong Jiang, Mary Beth Finn, Brandon B. Holmes, Lester I. Binder, Eva-Maria Mandelkow, Marc I. Diamond, Virginia M.-Y. Lee, and David M. Holtzman

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Neural correlates of visual–spatial attention in electrocorticographic signals in humans, Aysegul Gunduz, Peter Brunner, Amy Daitch, Eric C. Leuthardt, Anthony L. Ritaccio, Bijan Pesaran, and Gerwin Schalk

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Spinal reconstruction with pedicle screw-based instrumentation and rhBMP-2 in patients with neurofibromatosis and severe dural ectasia and spinal deformity: Report of two cases and a review of the literature, Samuel K. Cho, Geoffrey E. Stoker, and Keith H. Bridwell

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Neural representation of temporal duration: coherent findings obtained with the “lossy integration” model, Olga V. Sysoeva, Marc Wittmann, and Jiri Wackermann

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Ethanol enhances neurosteroidogenesis in hippocampal pyramidal neurons by paradoxical NMDA receptor activation, Kazuhiro Tokuda, Yukitoshi Izumi, and Charles F. Zorumski

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Controlled cortical impact traumatic brain injury in 3xTg-AD mice causes acute intra-axonal amyloid-β accumulation and independently accelerates the development of tau abnormalities, Hien T. Tran, Frank M. LaFerla, David M. Holtzman, and David L. Brody

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Exome sequencing identifies an MYH3 mutation in a family with distal arthrogryposis type 1, David M. Alvarado, Jillian G. Buchan, Christina A. Gurnett, and Matthew B. Dobbs

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Informatics and data mining tools and strategies for the Human Connectome Project, Daniel S. Marcus, John Harwell, Timothy Olsen, Michael Hodge, Matthew F. Glasser, Fred Prior, Mark Jenkinson, Timothy Laumann, Sandra W. Curtiss, and David C. Van Essen

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Role of guanylyl cyclase modulation in mouse cone phototransduction, Keisuke Sakurai, Jeannie Chen, and Vladimir J. Kefalov

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Biomedical and psychosocial factors associated with disability after peripheral nerve injury, Christine B. Novak, Dimitri J. Anastakis, Dorcas E. Beaton, Susan E. Mackinnon, and Joel Katz

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Evaluation of the toxicity of triamcinolone acetonide and dexamethasone sodium phosphate on human lens epithelial cells (HLE B-3), Ashish Sharma, Ashkan Pirouzmanesh, Jayaprakash Patil, M. F. Estrago-Franco, Leandro Cabral Zacharias, Usha P. Andley, M. Cristina Kenney, and Baruch D. Kuppermann

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Clinical presentation of symptomatic acetabular dysplasia in skeletally mature patients, Ryan M. Nunley, Heidi Prather, Devyani Hunt, Perry L. Schoenecker, and John C. Clohisy

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Incidence of symptomatic venous thromboembolism in oncologic patients undergoing lower-extremity endoprosthetic arthroplasty, Brandon A. Ramo, Anthony M. Griffin, Corey S. Gill, Douglas J. McDonald, Jay S. Wunder, Peter Ferguson, Robert S. Bell, Sharon E. Phillips, Herbert S. Schwartz, and Ginger E. Holt

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Radiographic structural abnormalities associated with premature, natural hip-joint failure, John C. Clohisy, Michael A. Dobson, Jason F. Robison, Lucian C. Warth, Jie Zheng, Steve S. Liu, Tameem M. Yehyawi, and John J. Callaghan

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Dehydroepiandrosterone (DHEA) replacement decreases insulin resistance and lowers inflammatory cytokines in aging humans, Edward P. Weiss, Dennis T. Villareal, Luigi Fontana, Dong-Ho Han, and John O. Holloszy

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Managing stress in the orthopaedic family: Avoiding burnout, achieving resilience, M. Catherine Sargent, Wayne Sotile, Mary O. Sotile, Harry Rubash, Peter S. Vezeridis, Larry Harmon, and Robert L. Barrack

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Congenital bone marrow failure in DNA-PKcs mutant mice associated with deficiencies in DNA repair, Shichuan Zhang, Hirohiko Yajima, HoangDinh Huynh, Junke Zheng, Elsa Callen, Hua-Tang Chen, Nancy Wong, Samuel Bunting, Yu-Fen Lin, Mengxia Li, Kyung-Jone Lee, Michael Story, Eric Gapud, Barry P. Sleckman, André Nussenzweig, Cheng Cheng Zhang, David J. Chen, and Benjamin P.C. Chen

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A behavioral analysis of spatial neglect and its recovery after stroke, Jennifer Rengachary, Biyu J. He, Gordon L. Shulman, and Maurizio Corbetta

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Long-term calorie restriction, but not endurance exercise, lowers core body temperature in humans, Andreea Soare, Roberto Cangemi, Daniela Omodei, John O. Holloszy, and Luigi Fontana

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Episodic memory retrieval, parietal cortex, and the default mode network: Functional and topographic analyses, Carlo Sestieri, Maurizio Corbetta, Gian Luca Romani, and Gordon L. Shulman

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The cytoplasmic adaptor protein Caskin mediates Lar signal transduction during Drosophila motor axon guidance, Yi-Lan Weng, Nan Liu, Aaron DiAntonio, and Heather T. Broihier

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Functional analysis of novel analogues of E3330 that block the redox signaling activity of the multifunctional AP endonuclease/redox signaling enzyme APE1/Ref-1, Mark R. Kelley, Meihua Luo, April Reed, Dian Su, Sarah Delaplane, Richard F. Borch, Rodney L. Nyland II, Michael L. Gross, and Millie M. Georgiadis

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Myxoid chondrosarcoma of the phalanx with an EWS translocation: A case report and review of the literature, David B. Bumpass, Michael Kyriakos, David A. Rubin, Paul R. Manske, and Charles A. Goldfarb

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Are dropped osteoarticular bone fragments safely reimplantable in vivo?, Benjamin Bruce, Shahin Sheibani-Rad, Deborah Appleyard, Ryan P. Calfee, Steven E. Reinert, Kimberle C. Chapin, and Christopher W. DiGiovanni

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IgH gene rearrangements as plasma biomarkers in Non- Hodgkin's lymphoma patients, Jian He, Jian Wu, Yuchen Jiao, Nina Wagner-Johnston, Richard F. Ambinder, Luis A. Diaz, Kenneth W. Kinzler, Bert Vogelstein, and Nickolas Papadopoulos

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Renal tumor models: Evaluation of ease of implementation, quality of composition, and imaging characteristics, Brian M. Benway, Jose M. Cabello, Alana C. Desai, Robert S. Figenshaw, and Sam B. Bhayani

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Effect of short-duration low-magnitude cyclic loading versus immobilization on tendon-bone healing after ACL reconstruction in a rat model, Robert H. Brophy, David Kovacevic, Carl W. Imhauser, Mark Stasiak, Asheesh Bedi, Alice J.S. Fox, Xiang-Hua Deng, and Scott A. Rodeo

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Nonuniform high-gamma (60-500 Hz) power changes dissociate cognitive task and anatomy in human cortex, Charles M. Gaona, Mohit Sharma, Zachary V. Freudenburg, Jonathan D. Breshears, David T. Bundy, Jarod Roland, Dennis L. Barbour, Gerwin Schalk, and Eric C. Leuthardt

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Calcium-independent inhibitory G-protein signaling induces persistent presynaptic muting of hippocampal synapses, Devon C. Crawford, Chun Yun Chang, Krzysztof L. Hyrc, and Steven Mennerick

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In vitro and in vivo evaluation of 64Cu-radiolabeled kccysl peptides for targeting epidermal growth factor receptor-2 in breast carcinomas, Senthil R. Kumar, Fabio A. Gallazzi, Riccardo Ferdani, Carolyn J. Anderson, Thomas P. Quinn, and Susan L. Deutscher

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6-OHDA generated ROS induces DNA damage and p53- and PUMA-dependent cell death, Alison I. Bernstein, Sean P. Garrison, Gerard P. Zambetti, and Karen L. O'Malley

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Abnormal presynaptic short-term plasticity and information processing in a mouse model of fragile X syndrome, Pan-Yue Deng, David Sojka, and Vitaly A. Klyachko

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Accurate quantification of lipid species by electrospray ionization mass spectrometry - Meet a key challenge in lipidomics, Kui Yang and Xianlin Han

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A clustering analysis of lipoprotein diameters in the metabolic syndrome, Alexis C. Frazier-Wood, Stephen Glasser, W Timothy Garvey, Edmond K. Kabagambe, Ingrid B. Borecki, Hemant K. Tiwari, Michael Y. Tsai, Paul N. Hopkins, Jose M. Ordovas, and Donna K. Arnett

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A comparison of vestibular spatiotemporal tuning in macaque parietoinsular vestibular cortex, ventral intraparietal area, and medial superior temporal area, Aihua Chen, Gregory C. DeAngelis, and Dora E. Angelaki

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Actin depolymerizing factor controls actin turnover and gliding motility in Toxoplasma gondii, Simren Mehta and L. David Sibley

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Activator protein 1 (AP-1) contributes to EpCAM-dependent breast cancer invasion, Narenda V. Sankpal, John D. Mayfield, Mike W. Willman, Timothy P. Fleming, and William E. Gillanders

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Acute impact of moderate-intensity and vigorous-intensity exercise bouts on daily physical activity energy expenditure in postmenopausal women, Xuewen Wang and Barbara J. Nicklas

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Adipose tissue endocannabinoid system gene expression: depot differences and effects of diet and exercise, Tongjian You, Beth L. Disanzo, Xuewen Wang, Rongze Yang, and Dawei Gong

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A dual role for A-type lamins in DNA double-strand break repair, Abena B. Redwood, Stephanie M. Perkins, Robert P. Vanderwaal, Zhihui Feng, Kenneth J. Biehl, Ignacio Gonzalez-Suarez, Lucia Morgado-Palacin, Wei Shi, Julien Sage, Joseph L. Roti-Roti, Colin L. Stewart, Junran Zhang, and Susana Gonzalo

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A genetic risk score combining ten psoriasis risk loci improves disease prediction, Haoyan Chen, Annie Poon, Celestine Yeung, Cynthia Helms, Jennifer Pons, Anne M. Bowcock, Pui-Yan Kwok, and Wilson Liao

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A genome-wide screen for interactions reveals a new locus on 4p15 modifying the effect of waist-to-hip ratio on total chloesterol, Andrew C. Heath and et al.

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A genomic storm in critically injured humans, Wenzhong Xiao, Bernard H. Brownstein, and et al

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Aging impacts isolated lymphoid follicle development and function, Keely G. McDonald, Matthew R. Leach, Conway Huang, Caihong Wang, and Rodney D. Newberry

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A high-sugar diet produces obesity and insulin resistance in wild-type Drosophila, Laura Palanker Musselman, Jill L. Fink, Kirk Narzinski, Prasanna Venkatesh Ramachandran, Sumitha Sukumar Hathiramani, Ross L. Cagan, and Thomas J. Baranski

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A knock-in mouse model for the R120G mutation of alphaBcrystallin recapitulates human hereditary myopathy and cataracts, Usha P. Andley, Paul D. Hamilton, Nathan Ravi, and Conrad C. Weihl

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Alcohol consumption and risk of renal cell cancer: The NIH-AARP diet and health study, Jasmine Q. Lew, Wongho Chow, Albert R. Hollenbeck, Arthur S. Schatzkin, and Yikyung Park

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A mathematical model for the determination of steady-state cardiolipin remodeling mechanisms using lipidomic data, Lu Zhang, Robert J. A. Bell, Michael A. Kiebish, Thomas N. Seyfried, Xianlin Han, Richard W. Gross, and Jeffrey H. Chuang

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A modified bacterial one-hybrid system yields improved quantitative models of transcription factor specificity, Ryan G. Christensen, Ankit Gupta, Zheng Zuo, Lawrence A. Schriefer, Scot A. Wolfe, and Gary D. Stormo

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A monomorphic haplotype of chromosome Ia is associated with widespread success in clonal and nonclonal populations of Toxoplasma gondii, Asis Khan, Natalie Miller, David S. Roos, J P. Dubey, Daniel Ajzenberg, Marie Laure Darde, James W. Ajioka, Benjamin Rosenthal, and L. David Sibley

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A monthly quality assurance procedure for 3D surface imaging, H. Omar Wooten, Eric E. Klein, Garima Gokrhoo, and Lakshmi Santanam

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An Asian Indian woman with wolfram syndrome on insulin pump: Successful pregnancy and beyond, Jotjydev Kesavadev, Anupam Kumar, Arun Shankar, Gopikakrishnan Gopalakrishnan, Marshall A. Permutt, Jon Wasson, and Sunitha Jothydev

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Ancestral genes can control the ability of horizontally acquired loci to confer new traits, H. Deborah Chen, Mollie W. Jewett, and Eduardo A. Groisman

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An evolutionary genomic approach to identify genes involved in human birth timing, Jevon Plunkett, Scott Doniger, Guilherme Orabona, Thomas Morgan, Ritva Haataja, Mikko Hallman, Hilkka Puttonen, Ramkumar Menon, Edward Kuczynski, Errol Norwitz, Victoria Snegovskikh, Aarno Palotie, Leena Peltonen, Vineta Fellman, Emily A. DeFranco, Bimal P. Chaudhari, Tracy L. McGregor, Jude J. McElroy, Matthew T. Oetjens, Kari Teramo, Ingrid Borecki, Justin Fay, and Louis Muglia

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A nine amino acid domain Is essential for mutant prion protein toxicity, Laura Westergard, Jessie A. Turnbaugh, and David A. Harris

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An RNA interference-based screen of transcription factor genes identifies pathways necessary for sensory regeneration in the avian inner ear, David M. Alvarado, R. D. Hawkins, Stavros Bashiardes, Rose A. Veile, Yuan-Chieh Ku, Kara E. Powder, Meghan K. Spriggs, Judith D. Speck, Mark E. Warchol, and Michael Lovett

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A perfusion MRI study of emotional valence and arousal in Parkinson's disease, Sunsern Limsoontarakul, Meghan C. Campbell, and Kevin J. Black

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APOE4 allele disrupts resting state fMRI connectivity in the absence of amyloid plaques or decreased CSF Aβ42, Yvette I. Sheline, John C. Morris, Abraham Z. Synder, Joseph L. Price, Zhizi Yan, Gina D'Angelo, Collin Liu, Sachin Dixit, Tammie Benzinger, Anne Fagan, Alison Goate, and Mark A. Mintun

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A portable site: a binding element for 17β-estradiol can be placed on any subunit of a nicotinic α4β2 receptor, Xiaochun Jin and Joe H. Steinbach

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Application of Bayesian network structure learning to identify causal variant SNPs from resequencing data, Christopher E. Schlosberg, Tae-Hwi Schwantes-An, Weimin Duan, and Nancy L. Saccone

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Application of collapsing methods for continuous traits to the Genetic Analysis Workshop 17 exome sequence data, Yun Ju Sung, Treva K. Rice, and Dabeeru C. Rao

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A rapid communication from the AAPM Task Group 201: Recommendations for the QA of external beam radiotherapy data transfer. AAPM TG 201: Quality assurance of external beam radiotherapy data transfer, R. Alfredo Siochi, Peter Balter, Charles D. Bloch, Lakshmi Santanam, Kurt Blodgett, Bruce H. Curran, Martijn Engelsman, Wenzheng Feng, Jim Mechalakos, Dan Pavord, Tom Simon, Steven Sutlief, and X. Ronald Zhu

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A recurrent missense mutation in GJA3 associated with autosomal dominant cataract linked to chromosome 13q, Thomas M. Bennett and Alan Shiels

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Arhgap24 inactivates Rac1 in mouse podocytes, and a mutant form is associated with familial focal segmental glomerulosclerosis, Shreeram Akilesh, Hani Suleiman, Christine Stander, Haiyang Yu, Peter Lavin, Rasheed Gbadegesin, Corinne Antignac, Martin Pollack, Jeffrey B. Kopp, Michelle P. Winn, and Andrey S. Shaw

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A sensitive high-throughput assay for evaluating host-pathogen interactions in cryptococcus neoformans infection, Deepa Srikanta, Meng Yang, Matthew Williams, and Tamara L. Doering

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Assessing the effects of symmetry on motif disovery and modeling, Lala M. Motlhabi and Gary D. Stormo

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Assessing the optimal definition of oligohydramnios associated with adverse neonatal outcomes, Anthony Shanks, Methodius Tuuli, Caren Schaecher, Anthony O. Odibo, and Roxane Rampersad

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Astrovirus MLB1 Is not associated with diarrhea in a cohort of Indian children, Lori R. Holtz, Irma K. Bauer, Priya Rajendran, Gagandeep Kang, and David Wang

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Astrovirus MLB2 Viremia in febrile child, Lori R. Holtz, Kristine M. Wylie, Erica Sodergren, Yanfang Jiang, Carl J. Franz, George M. Weinstock, Gregory A. Storch, and David Wang

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A temporal role Of Type I interferon signaling in CD8+ T Cell maturation during acute West Nile virus infection, Amelia K. Pinto, Stephane Daffis, James D. Brien, Maria D. Gainey, Wayne M. Yokoyama, Kathleen C.F Sheehan, Kenneth M. Murphy, Robert D. Schreiber, and Michael S. Diamond

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A test for common genetic and environmental vulnerability to depression and diabetes, Jeffrey F. Scherrer, Hong Xian, Patrick J. Lustman, Carol E. Franz, Jeanne McCaffery, Michael J. Lyons, Kristen C. Jacobsen, and William S. Kremen

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Autophagy in antigen-presenting cells results in presentation of citrullinated peptides to CD4 T cells, Jamie M. Ireland and Emil R. Unanue

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Autophagy switches to apoptosis in prostate cancer cells infected with melanoma differentiation associated gene-7/interleukin-24 (mda-7/IL-24), Sujit K. Bhutia, Swadesh K. Das, Belal Azab, Rupesh Dash, Zhao-zhong Su, Seok-Geun Lee, Paul Dent, David T. Curiel, Devanand Sarkar, and Paul B. Fisher

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A vertebrate case study of the quality of assemblies derived from next-generation sequences, Liang Ye, LaDeana W. Hillier, Patrick Minx, Nay Thane, Devin P. Locke, John C. Martin, Lei Chen, Makedonka Mitreva, Jason R. Miller, Kevin V. Haub, David J. Dooling, Elaine R. Mardis, Richard K. Wilson, George M. Weinstock, and Wesley C. Warren

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Barth syndrome mutations that cause tafazzin complex lability, Steven M. Claypool, Kevin Whited, Santi Srijumnong, Xianlin Han, and Carla M. Koehler

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Batf3-Dependent CD11b peripheral dendritic cells are GM-CSF-independent and are not required for Th Cell priming after subcutaneous immunization, Brian T. Edelson, Tara R. Bradstreet, Wumesh KC, Kai Hildner, Jeremy W. Herzog, Julia Sim, John H. Russell, Theresa L. Murphy, Emil R. Unanue, and Kenneth M. Murphy