The Open Access Publications collection contains peer-reviewed articles authored by Washington University School of Medicine faculty that have been published in open access journals or authorized by the publishers for open access availability. Open access works are generally defined as being publicly available online and free of most licensing and copyright restrictions. The Bernard Becker Medical Library maintains this collection in support of Washington University’s commitment to the principles of open access publishing and making the scholarly work and research results of our faculty as widely and easily available as possible.
You can find more information about Washington University's Open Access Resolution in Becker Medical Library's Open Access subject guide “OA Resolution at WU”
Submissions from 2015
Diagnostic value of subjective memory complaints assessed with a single item in dominantly inherited Alzheimer’s disease: Results of the DIAN study, Mateusz S. Jasielec, Randall J. Bateman, Virginia Buckles, John C. Morris, Dominantly Inherited Alzheimer Network DIAN, and et al
Peptidases compartmentalized to the Ascaris suum intestinal lumen and apical intestinal membrane, Douglas P. Jasmer, Bruce A. Rosa, and Makedonka Mitreva
Spatiotemporal regulation of a Legionella pneumophila T4SS substrate by the metaeffector SidJ, Kwang Cheol Jeong, Jessica A. Sexton, and Joseph P. Vogel
Rare manifestation of a c.290 C>T, p.Gly97Glu VCP mutation, Nivedita U. Jerath, Cameron D. Crockett, Steven A. Moore, Michael E. Shy, Conrad C. Weihl, Tsui-Fen Chou, Tiffany Grider, Michael A. Gonzalez, Stephan Zuchner, and Andrea Swenson
A shared neural network for emotional expression and perception: An anatomical study in the macaque monkey, Ahmad Jezzini, Stefano Rozzi, Elena Borra, Vittorio Gallese, Fausto Caruana, and Marzio Gerbella
A Gamma-Knife-enabled mouse model of cerebral single-hemisphere delayed radiation necrosis, Xiaoyu Jiang, Liya Yuan, John A. Engelbach, Jeremy Cates, Carlos J. Perez-Torres, Feng Gao, Dinesh Thotala, Robert E. Drzymala, Robert E. Schmidt, Keith M. Rich, Dennis E. Hallahan, Joseph J. H. Ackerman, and Joel R. Garbow
Optomechanically-induced transparency in parity-time-symmetric microresonators, H. Jing, Sahin K. Ozdemir, Z. Geng, Jing Zhang, Xin-You Lu, Bo Peng, Lan Yang, and Franco Nori
Surgery for lymph node metastases of medullary thyroid carcinoma, Linda X. Jin and Jeffrey F. Moley
TREM2 is associated with increased risk for Alzheimer’s disease in African Americans, Sheng Chih Jin, Bruno A. Benitez, Tara Skorupa, David Carrell, Dwani Patel, Alison M. Goate, Carlos Cruchaga, Nilufer Ertekin-Taner, and et al
Potentiation of neuronal nicotinic receptors by 17β-estradiol: Roles of the carboxy-terminal and the amino-terminal extracellular domains, Xiaochun Jin and Joe Henry Steinbach
Role of copper efflux in pneumococcal pathogenesis and resistance to macrophage-mediated immune clearance, Michael D L Johnson, Thomas E. Kehl-Fie, Roger Klein, Jacqueline Kelly, Corinna Burnham, Beth Mann, and Jason W. Rosch
A tumor growth inhibition model based on M-protein levels in subjects with relapsed/refractory multiple myeloma following single-agent carfilzomib use, F. Jonsson, Y. Ou, L. Claret, D. Siegel, S. Jagannath, R. Vij, A. Badros, S. Aggarwal, and R. Bruno
Tolerance and cross-tolerance following Toll-like receptor (TLR)-4 and -9 activation are mediated by IRAK-M and modulated by IL-7 in murine splenocytes, Mark W. Julian, Heather R. Strange, Megan N. Ballinger, Richard S. Hotchkiss, Tracey L. Papenfuss, and Elliott D. Crouser
Impact of neonatal intensive care bed configuration on rates of late-onset bacterial sepsis and methicillin-resistant Staphylococcus aureus colonization, Samuel Julian, Carey-Ann D. Burnham, Patricia Sellenriek, William D. Shannon, Aaron Hamvas, Phillip I. Tarr, and Barbara B. Warner
Combined epiretinal and internal limiting membrane peeling facilitated by high dilution indocyanine green negative staining, Mark M. Kaehr and Rajendra S. Apte
Deficient event-related theta oscillations in individuals at risk for alcoholism: A study of reward processing and impulsivity features, Chella Kamarajan, Ashwini K. Pandey, David B. Chorlian, Niklas Manz, Arthur T. Stimus, Andrey P. Anokhin, Lance O. Bauer, Samuel Kuperman, John Kramer, Kathleen K. Bucholz, Marc A. Schuckit, Victor M. Hesselbrock, and Bernice Porjesz
High-specificity targeted functional profiling in microbial communities with ShortBRED, James Kaminski, Molly K. Gibson, Eric A. Franzosa, Nicola Segata, Gautam Dantas, and Curtis Huttenhower
Patterns of antiplatelet agent use in the US, Vijay Kanakadandi, Sravanthi Parasa, Preetika Sihn, Mandeep Singh, Maria Giacchino, Neil Gupta, Srinivas Gaddam, Amit Rastogi, Ajay Bansal, John Petrini, and Prateek Sharma
A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing, Cyriac Kandoth and et al
The role of dopamine and dopaminergic pathways in dystonia: Insights from neuroimaging, Morvarid Karimi and Joel S Perlmutter
Radiation dosimetry of [ 18 F]VAT in nonhuman primates, Morvarid Karimi, Zhude Tu, Xuyi Yue, Xiang Zhang, Hongjun Jin, Joel S. Perlmutter, and Richard Laforest
Increased glutamine catabolism mediates bone anabolism in response to WNT signaling, Courtney M. Karner, Emel Esen, Adewole L. Okunade, Bruce W. Patterson, and Fanxin Long
Macrophage recruitment and epithelial repair following hair cell injury in the mouse utricle, Tejbeer Kaur, Keiko Hirose, Edwin W. Rubel, and Mark E. Warchol
Fractalkine signaling regulates macrophage recruitment into the cochlea and promotes the survival of spiral ganglion neurons after selective hair cell lesion, Tejbeer Kaur, Darius Zamani, Ling Tong, Edwin W. Rubel, Kevin K. Ohlemiller, Keiko Hirose, and Mark E. Warchol
Hepatitis C virus RNA replication depends on specific cis- and trans-acting activities of viral nonstructural proteins, Teymur Kazakov, Feng Yang, Harish N. Ramanathan, Andrew Kohlway, Michael S. Diamond, and Brett D. Lindenbach
Progressive hearing loss in mice carrying a mutation in Usp53, Marcin Kazmierczak, Suzan L. Harris, Piotr Kazmierczak, Prahar Shah, Valentin Starovoytov, Kevin K. Ohlemiller, and Martin Schwander
Transcriptomic responses of the heart and brain to anoxia in the Western Painted turtle, Sarah W. Keenan, Craig A. Hill, Cyriac Kandoth, Leslie T. Buck, and Daniel E. Warren
Malaria parasites produce volatile mosquito attractants, Megan Kelly, Chih-Ying Su, Chad Schaber, Jan R. Crowley, Fong-Fu Hsu, John R. Carlson, and Audrey R. Odom
Complete genome sequences of two Helicobacter pylori strains from a Canadian Arctic Aboriginal community, Dangeruta Kersulyte, M. Teresita Bertoli, Sravya Tamma, Monika Keelan, Rachel Munday, Janis Geary, Sander Veldhuyzen van Zanten, Karen J. Goodman, and Douglas E. Berg
Cerebrospinal fluid VILIP-1 and YKL-40, candidate biomarkers to diagnose, predict and monitor Alzheimer’s disease in a memory clinic cohort, Maartje I. Kester, Charlotte E. Teunissen, Courtney Sutphen, Elizabeth M. Herries, Jack H. Ladenson, Chengjie Xiong, Philip Sheltens, Wiesje M. van der Flier, John C. Morris, David M. Holtzman, and Anne M. Fagan
Typhoid fever in young children in Bangladesh: Clinical findings, antibiotic susceptibility pattern and immune responses, Farhana Khanam, Md. Abu Sayeed, Feroza Kaneez Choudhury, Alaullah Sheikh, Dilruba Ahmed, Doli Goswami, Md. Lokman Hossain, Abdullah Brooks, Stephen B. Calderwood, Richelle C. Charles, Alejandro Cravioto, Edward T. Ryan, and Firdausi Qadri
Highly sensitive image-derived indices of water-stressed plants using hyperspectral imaging in SWIR and histogram analysis, David M. Kim, Hairong Zhang, Haiying Zhou, Tommy Du, Qian Wu, Todd C. Mockler, and Mikhail Y. Berezin
Retroperitoneal robot-assisted partial nephrectomy for posterior renal masses is associated with earlier hospital discharge: A single-institution retrospective comparison, Eric H. Kim, Jeffery A. Larson, Aaron M. Potretzke, Nicholas K. Hulsey, Sam B. Bhayani, and R. Sherburne Figenshau
MicroRNA-33 regulates apoE lipidation and amyloid-β metabolism in the brain, Jaekwang Kim, Hyejin Yoon, Jack M. Burchett, Jessica L. Restivo, Philip B. Verghese, David M. Holtzman, John R. Cirrito, Jungsu Kim, and et al
A genetically modified adenoviral vector with a phage display-derived peptide incorporated into fiber fibritin chimera prolongs survival in experimental glioma, Julius W. Kim, J. Robert Kane, Jacob S. Young, Alan L. Chang, Deepak Kanojia, Ramin A. Morshed, Jason Miska, Atique U. Ahmed, Irina V. Balyasnikova, Yu Han, Lingjiao Zhang, David T. Curiel, and Maciej S. Lesniak
An excitatory amacrine cell detects object motion and provides feature-selective input to ganglion cells in the mouse retina, Tahnbee Kim, Florentina Soto, and Daniel Kerschensteiner
Distinct transcriptomic features are associated with transitional and mature B-cell populations in the mouse spleen, Eden Kleiman, Daria Salyakina, Magali De Heusch, Kristen L. Hoek, Joan M. Llanes, Iris Castro, Jacqueline A. Wright, Emily S. Clark, Derek M. Dykxhoorn, Enrico Capobianco, Akiko Takeda, Ryan M. McCormack, Eckhard R. Podack, Jean-Christophe Renauld, and Wasif N. Khan
Interventions to slow aging in humans: Are we ready?, Samuel Klein and et al
Maternal obesity and rectovaginal group B streptococcus colonization at term, Shelby M. Kleweis, Alison G. Cahill, Anthony O. Odibo, and Methodius G. Tuuli
Comparing expert reported outcomes to national surgical quality improvement program risk calculator-predicted outcomes: Do reporting standards differ?, B. A. Knight, Aaron M. Protretzke, Jeffrey A. Larson, and Sam B. Bhayani
Missouri mothers and their children: A family study of the effects of genetics and the prenatal environment, Valerie S. Knopik, Andrew C. Heath, Kristine Marceau, Rohan H C Palmer, John E. McGeary, Alexandre Todorov, and Allison S. Evans
Regulation of yeast DNA polymerase δ-mediated strand displacement synthesis by 5'-flaps, Katrina N. Koc, Joseph L. Stodola, Peter M. Burgers, and Roberto Galletto
Notch signaling controls chondrocyte hypertrophy via indirect regulation of Sox9, Anat Kohn, Timothy P. Rutkowski, Zhaoyang Liu, Anthony J. Mirando, Michael J. Zuscik, Regis J. O'Keefe, and Matthew J. Hilton
Moving from capstones toward cornerstones: Successes and challenges in applying systems biology to identify mechanisms of autism spectrum disorders, Nathan Kopp, Sharlee Climer, and Joseph D. Dougherty
NDRG4 is a novel oncogenic protein and p53 associated regulator of apoptosis in malignant meningioma cells, Rama P. Kotipatruni, Xuan Ren, Dinesh Thotala, and Jerry J. Jaboin
Ribosomes slide on lysine-encoding homopolymeric A stretches., Kristin S. Koutmou, Anthony P. Schuller, Julie L. Brunelle, Aditya Radhakrishnan, Sergej Djuranovic, and Rachel Green
Analysis of the role of the C-terminal tail in the regulation of the epidermal growth factor receptor, Erika Kovacs, Rahul Das, Qi Wang, Timothy S. Collier, Aaron Cantor, Yongjian Huang, Kathryn Wong, Amar Mirza, Tiago Barros, Patricia Grob, Natalia Jura, Ron Bose, and John Kuriyan
Diastolic function in heart failure, Sándor J. Kovács
The glucose transporter PfHT1 is an antimalarial target of the HIV protease inhibitor lopinavir, Thomas E. Kraft, Christopher Armstrong, Monique R. Heitmeier, Audrey R. Odom, and Paul W. Hruz
Hookah-related Twitter chatter: A content analysis, Melissa J. Krauss, Shaina J. Sowles, Megan Moreno, Kidist Zewdie, Richard A. Grucza, Laura J. Beirut, and Patricia A. Cavazos-Rehg
Cortical alpha activity predicts the confidence in an impending action, Jan Kubanek, N. Jeremy Hill, Lawrence H. Snyder, and Gerwin Schalk
Cognitive and action-based aspects of developing decisions in parietal cortex, Jan Kubanek and Eric Mooshagian
Matching behavior as a tradeoff between reward maximization and demands on neural computation, Jan Kubanek and Lawrence H. Snyder
Reward-based decision signals in parietal cortex are partially embodied, Jan Kubanek and Lawrence H. Snyder
Agitation down-regulates immunoglobulin binding protein EibG expression in Shiga toxin-producing Escherichia coli (STEC), Thorsten Kuczius, Wenlan Zhang, Viktor Merkel, Alexander Mellmann, Phillip I. Tarr, and Helge Karch
Human DNA ligase III bridges two DNA ends to promote specific intermolecular DNA end joining, Vandna Kukshal, In-Kwon Kim, Gregory L. Hura, Alan E. Tomkinson, John A. Tainer, and Tom Ellenberger
Trade-offs in the effects of the apolipoprotein E polymorphism on risks of diseases of the heart, cancer, and neurodegenerative disorders: Insights on mechanisms from the long life family study, Alexander M. Kulminski, Konstantin G. Arbeev, Irina Culminskaya, Svetlana V. Ukraintseva, Eric Stallard, Michael A. Province, and Anatoli I. Yashin
Awareness of the association between obesity and peri-operative risk among newly diagnosed patients with complex atypical hyperplasia and endometrial cancer, Lindsay M. Kuroki, Teri E. Benn, Jonathan L. Dukes, Andrea R. Hagemann, Premal H. Thaker, Matthew A. Powell, David G. Mutch, L. Stewart Massad, and Israel Zighelboim
Randomized controlled trial to determine the impact of probiotic administration on colonization with multidrug-resistant organisms in critically ill patients, Jennie H. Kwon, Kerry M. Bommarito, Kimberly A. Reske, Sondra M. Seiler, Tiffany Hink, Hilary M. Babcock, Marin H. Kollef, Victoria J. Fraser, Carey-Ann D. Burnham, and Erik R. Dubberke
Correlation between psychological stress levels and the severity of overactive bladder symptoms, Henry Lai, Vivien Gardner, Joel Vetter, and Gerald L. Andriole
Restriction of dietary protein decreases mTORC1 in tumors and somatic tissues of a tumor-bearing mouse xenograft model, Dudley W. Lamming, Nicole E. Cummings, Antonella L. Rastelli, Feng Gao, Edda Cava, Beatrice Bertozzi, Francesco Spelta, Roberto Pili, and Luigi Fontana
Phenotypic variation Is almost entirely independent of the host-pathogen relationship in clinical isolates of S. aureus, Adrian D. Land, Patrick Hogan, Stephanie Fritz, and Petra Anne Levin
CARMIL2 is a novel molecular connection between vimentin and actin essential for cell migration and invadopodia formation, Hunter M. Lanier, Taekyung Kim, and John A. Cooper
Chloride–hydrogen antiporters ClC‐3 and ClC‐5 drive osteoblast mineralization and regulate fine‐structure bone patterning in vitro, Quitterie C. Larrouture, Deborah J. Nelson, Lisa J. Robinson, Li Liu, Irina Tourkova, Paul H. Schlesinger, and Harry C. Blair
Nonmodifiable factors and complications contribute to length of stay in robot-assisted partial nephrectomy, Jeffrey A. Larson, Jihad H. Kaouk, Michael D. Stifelman, Craig G. Rogers, Mohamad E. Allaf, Aaron Potretzke, Susan Marshall, Homayoun Zargar, Mark W. Ball, and Sam B. Bhayani
Long-term neural and physiological phenotyping of a single human, Timothy O. Laumann, Evan Gordon, Abraham Z. Snyder, Babatunde Adeyemo, Steven E. Petersen, and et al
De novo assembly and transcriptome analysis of Plasmodium gallinaceum identifies the Rh5 interacting protein (ripr), and reveals a lack of EBL and RH gene family diversification, Elvin J. Lauron, Han Xian Aw Yeang, Samantha M. Taffner, and Ravinder N.M. Sehgal
Dialysis enrollment patterns in Guatemala: Evidence of the chronic kidney disease of non-traditional causes epidemic in Mesoamerica, Timothy S. Laux, Joaquin Barnoya, Douglas R. Guerrero, and Marcos Rothstein
The Relevance of the Colon to Zinc Nutrition, Geetha Lavaniya Gopalsamy, David H. Alpers, Henry J. Binder, Cuong D. Tran, B. S. Ramakrishna, Ian Brown, Mark Manary, Elissa Mortimer, and Graeme P. Young
Concomitant Cox-Maze IV techniques during mitral valve surgery, Christopher P. Lawrance, Matthew C. Henn, and Ralph J. Damiano Jr.
IgG4-associated orbital and ocular inflammation, Cecilia S. Lee, George J. Harocopos, Courtney L. Kraus, Aaron Y. Lee, Gregory P. Van Stavern, Steven M. Couch, and P. Kumar Rao
Lack of neuroinflammation in the HIV-1 transgenic rat: An [18 F]-DPA714 PET imaging study, Dianne E. Lee, Xuyi Yue, Wael G. Ibrahim, Margaret R. Lentz, Kristin L. Peterson, Elaine M. Jagoda, Michael Kassiou, Dragan Maric, William C. Reid, and Dima A. Hammoud
Development of an ex vivo model for the study of cerebrovascular function utilizing isolated mouse olfactory artery, Hyung-Jin Lee, Hans H. Dietrich, Byung Hee Han, and Gregory J. Zipfel
Developmental enhancers revealed by extensive DNA methylome maps of zebrafish early embryos, Hyung Joo Lee, Rebecca F. Lowdon, Brett Maricque, Bo Zhang, Michael Stevens, Daofeng Li, Stephen L. Johnson, and Ting Wang
Eisosome ultrastructure and evolution in fungi, microalgae, and lichens, Jae-Hyeok Lee, John E. Heuser, Robyn Roth, and Ursula Goodenough
The association of parental temperament and character on their children’s behavior problems, Soo Jin Lee, C. Robert Cloninger, Soo Hyun Park, and Han Chae
Pulmonary Function Following Adult Spinal Deformity Surgery: Minimum Two-Year Follow-up, Ronald A. Lehman Jr., Daniel G. Kang, Lawrence G. Lenke, Jeremy J. Stallbaumer, and Brenda A. Sides
Long-term safety and efficacy of antithymocyte globulin induction: Use of integrated national registry data to achieve ten-year follow-up of 10-10 Study participants, Krista L. Lentine, Mark A. Schnitzler, Huiling Xiao, and Daniel C. Brennan
Drug metabolizing enzyme and transporter gene variation, nicotine metabolism, prospective abstinence, and cigarette consumption, Christina N. Lessov-Schlaggar and et al.
ORegAnno 3.0: A community-driven resource for curated regulatory annotation, Robert Lesurf, Kelsy C. Cotto, Grace Wang, Malachi Griffith, Katayoon Kasaian, Steven J M Jones, Stephen B. Montgomery, Obi L. Griffith, and The Open Regulatory Annotation Consortium
An intrinsically disordered peptide from Ebola virus VP35 controls viral RNA synthesis by modulating nucleoprotein-RNA interactions, Daisy Leung, Jennifer M. Binning, Gai Liu, Ian B. Harvey, Juanli Pan, Gaya K. Amarasinghe, and et al
Effects of CD2-associated protein deficiency on amyloid-β in neuroblastoma cells and in an APP transgenic mouse model, Fan Liao, Hong Jiang, Subhashini Srivatsan, Qingli Xiao, Katheryn B. Lefton, Kaoru Yamada, Thomas E. Mahan, Jin-Moo Lee, Andrey S. Shaw, and David M. Holtzman
Murine versus human apolipoprotein E4: Differential facilitation of and co-localization in cerebral amyloid angiopathy and amyloid plaques in APP transgenic mouse models, Fan Liao, Tony J. Zhang, Hong Jiang, Katheryn B. Lefton, Grace O. Robinson, Robert Vassar, Patrick M. Sullivan, and David M. Holtman
Head position change is not associated with acute changes in bilateral cerebral oxygenation in stable preterm infants during the first 3 days of life, Steve Ming-Che Liao, Rakesh Rao, and Amit M. Mathur
Expression of five acetylcholine receptor subunit genes in Brugia malayi adult worms, Ben-Wen Li, Amy C. Rush, and Gary J. Weil
Genetic heterogeneity of induced pluripotent stem cells: Results from 24 clones derived from a single C57BL/6 mouse, Cheng Li, Jeffery M. Klco, Nichole M. Helton, Daniel R. George, Jacqueline L. Mudd, Christopher A. Miller, Charles Lu, Robert Fulton, Michelle O'Laughlin, Catrina Fronick, Richard K. Wilson, and Timothy J. Ley
Species-specific transmission of novel picornaviruses in lemurs, Efrem S. Lim, Sharon L. Deem, Ingrid J. Porton, Song Cao, and David Wang
Role of hypoxia inducible factor-1α (HIF-1α) in innate defense against uropathogenic Escherichia coli infection, Ann E. Lin, Federico C. Beasley, Joshua Olson, Nadia Keller, Robert A. Shalwitz, Thomas J. Hannan, Scott J. Hultgren, and Victor Nizet
Molecular dynamics simulations of KirBac1.1 mutants reveal global gating changes of Kir channels, Tobias Linder, Shizhen Wang, Eva-Maria Zangerl-Plessl, Colin G Nichols, and Anna Stary-Weinzinger
A NIMA-related kinase suppresses the flagellar instability associated with the loss of multiple axonemal structures, Huawen Lin, Zhengyan Zhang, Suyang Guo, Fan Chen, Jonathan M. Kessler, Yan Mei Wang, and Susan K. Dutcher
Plasma biomarker of dietary phytosterol intake, Xiaobo Lin, Susan B. Racette, Lina Ma, Michael Wallendorf, Catherine Anderson Spearie, and Richard E. Ostlund Jr.
Novel APC promoter and exon 1B deletion and allelic silencing in three mutation-negative classic familial adenomatous polyposis families, Yiing Lin, Shin Lin, Melanie D. Baxter, Lawrence Lin, Susan M. Kennedy, Zhengyan Zhang, Paul J. Goodfellow, William C. Chapman, and Nicholas O. Davidson
In vivo evaluation of adipose-derived stromal cells delivered with a nanofiber scaffold for tendon-to-bone repair, Justin Lipner, Hua Shen, Leonardo Cavinatto, Wenying Liu, Necat Havlioglu, Younan Xia, Leesa M. Galatz, and Stavros Thomopoulos
Complement regulator CD46: Genetic variants and disease associations, M. Kathryn Liszewski and John P. Atkinson
Influence of model boundary conditions on blood flow patterns in a patient specific stenotic right coronary artery, Biyue Liu, Jie Zheng, Richard Bach, and Dalin Tang
Phosphorylation of the BNIP3 C-terminus inhibits mitochondrial damage and cell death without blocking autophagy, Katherine E. Liu and William A. Frazier
Pirt contributes to uterine contraction‑induced pain in mice, Qin Liu and et al
Assessing computational steps for CLIP-seq data analysis, Qi Liu, Xue Zhong, Blair B. Madison, Anil K. Rustgi, and Yu Shyr
Vasohibin-1 suppresses colon cancer, Shuai Liu, Bing Han, Qunyuan Zhang, Jie Dou, Fang Wang, Wenli Lin, Yuping Sun, and Guangyong Peng
Interring gas dynamic analysis of piston in a diesel engine considering the thermal effect, Wanyou Li, Yibin Guo, Tao He, Xiqun Lu, and Dequan Zou
