The Open Access Publications collection contains peer-reviewed articles authored by Washington University School of Medicine faculty that have been published in open access journals or authorized by the publishers for open access availability. Open access works are generally defined as being publicly available online and free of most licensing and copyright restrictions. The Bernard Becker Medical Library maintains this collection in support of Washington University’s commitment to the principles of open access publishing and making the scholarly work and research results of our faculty as widely and easily available as possible.
You can find more information about Washington University's Open Access Resolution in Becker Medical Library's Open Access subject guide “OA Resolution at WU”
Submissions from 2014
Variation in genes that regulate blood pressure are associated with glomerular filtration rate in Chinese, Charles Gu, Treva K. Rice, Dabeeru C. Rao, and et al
Isoprenoid Biosynthesis in Plasmodium falciparum, Ann M. Guggisberg, Rachel E. Amthor, and Audrey R. Odom
A sugar phosphatase regulates the methylerythritol phosphate (MEP) pathway in malaria parasites, Ann M. Guggisberg, Jooyoung Park, Rachel L. Edwards, Megan L. Kelly, Dana M. Hodge, Niraj H. Tolia, and Audrey R. Odom
Sequence specificity incompletely defines the genome-wide occupancy of Myc, Jiannan Guo, Tiandao Li, Joshua Schipper, Kyle A. Nilson, Francis K. Fordjour, Jeffrey J. Cooper, Raluca Gordan, and David H. Price
Over-expression of TRESK K(+) channels reduces the excitability of trigeminal ganglion nociceptors, Zhaohua Guo and Yu-Qing Cao
An improved predictive recognition model for Cys2-His2 zinc finger proteins, Ankit Gupta, Ryan G. Christensen, Heather A. Bell, Mathew Goodwin, Ronak Y. Patel, Manishi Pandey, Metewo Selase Enuameh, Amy L. Rayla, Cong Zhu, Stacey Thibodeau-Beganny, Michael H. Brodsky, J Keith Joung, Scot A. Wolfe, and Gary D. Stormo
MOF phosphorylation by ATM regulates 53BP1-mediated double-strand break repair pathway choice, Arun Gupta, Clayton R. Hunt, Nobuo Horikoshi, Raj K. Pandita, Tej K. Pandita, and et al
Localizing ECoG electrodes on the cortical anatomy without post-implantation imaging, Disha Gupta, N. Jeremy Hill, Matthew A. Adamo, Anthony Ritaccio, and Gerwin Schalk
BMPRIA mediated signaling is essential for temporomandibular joint development in mice, Shuping Gu, Weijie Wu, Chao Liu, Ling Yang, Cheng Sun, Wenduo Ye, Xihai Li, Jianquan Chen, Fanxin Long, and YiPing Chen
The taxonomy of brain cancer stem cells: What's in a name?, David H. Gutmann
Ambra1 is an essential regulator of autophagy and apoptosis in SW620 cells: Pro-survival role of Ambra1, Wen Gu, Daiwei Wan, Qinyi Qian, Bin Yi, Zhilong He, Yilin Gu, Liang Wang, and Songbing He
Association of atypical femoral fractures with bisphosphonate use by patients with varus hip geometry, Jennifer E. Hagen, Anna N. Miller, Susan M. Ott, Michael Gardner, Saam Morshed, Kyle Jeray, Timothy B. Alton, Dennis Ren, W. Parker Abblitt, and James C. Krieg
Evaluation of a real-time PCR assay for simultaneous detection of Kingella kingae and Staphylococcus aureus from synovial fluid in suspected septic arthritis, Malay Haldar, Meghan A. Butler, Criziel D. Quinn, Charles W. Stratton, Yi-Wei Tang, and Carey-Ann D. Burnham
Functional characterization improves associations between rare non-synonymous variants in CHRNB4 and smoking behavior, Gabe Haller, Ping Li, Caroline Esch, Simon Hsu, Alison M. Goate, and Joe Henry Steinbach
Inhibition of cyclooxygenase-2 prevents chronic and recurrent cystitis, Thomas J. Hannan, Terrence E. Riehl, Jana M. Binkley, Drew J. Schwartz, Hiroyuki Miyoshi, Thaddeus S. Stappenbeck, William F. Stenson, Marco Colonna, Scott J. Hultgren, and et al
BioPen: direct writing of functional materials at the point of care, Yu Long Han, Jie Hu, Guy M. Genin, Tian Jian Lu, and Feng Xu
Invariance and plasticity in the Drosophila melanogaster metabolomic network in response to temperature, Ramkumar Hariharan, Jessica M. Hoffman, Ariel S. Thomas, Quinlyn A. Soltow, Dean P. Jones, and Daniel E.L. Promislow
Gender differences in outcomes of patients with cystic fibrosis, Cayce L. Harness-Brumley, Alan C. Elliot, Daniel B. Rosenbluth, Deepa Raghavan, and Raksha Jain
Bony abnormalities of the hip joint: a new comprehensive, reliable and radiation-free measurement method using magnetic resonance imaging, Marcie Harris-Hayes, Paul K. Commean, Jacqueline D. Patterson, John C. Clohisy, and Travis J. Hillen
Relative mortality in U.S. Medicare beneficiaries with Parkinson disease and hip and pelvic fractures, Marcie Harris-Hayes, Allison W. Willis, Sandra E. Klein, Sylvia Czuppon, Beth Crowner, and Brad A. Racette
Information-seeking among chronic disease prevention staff in state health departments: Use of academic journals, Jenine K. Harris, Peg Allen, Rebekah R. Jacob, Lindsay Elliott, and Ross C. Brownson
Ureteral stent placement increases the risk for developing BK viremia after kidney transplantation., Faris Hashim, Shehzad Rehman, Jon A. Gregg, and Vikas R. Dharnidharka
Circadian rhythm reprogramming during lung inflammation, Jeffrey A. Haspel and et al
A critical review of the role of local excision in the treatment of early (T1 and T2) rectal tumors, Thomas A. Heafner and Sean C. Glasgow
Novel loci affecting iron homeostasis and their effects in individuals at risk for hemochromatosis, Andrew C. Heath and Pamela A. F. Madden
Generation and analysis of novel plant-derived antibody-based therapeutic molecules against West Nile virus, Junyun He, Huafang Lai, Michael Engle, Sergey Gorlatov, Clemens Gruber, Herta Steinkellner, Michael S. Diamond, and Qiang Chen
Evaluating new therapies in gastrointestinal stromal tumor using in vivo molecular optical imaging, Harvey Hensley, Karthik Devarajan, James R. Johnson, David Piwnica-Worms, Andrew K. Godwin, Margaret von Mehren, and Lori Rink
Data dictionary services in XNAT and the Human Connectome Project, Rick Herrick, Michael McKay, Timothy Olsen, William Horton, Mark Florida, Charles J. Moore, and Daniel S. Marcus
Thermomechanical fatigue life prediction for a marine diesel engine piston considering ring dynamics, Tao He, Xiqun Lu, Dequan Zou, Yibin Guo, Wanyou Li, and Minli Huang
Some personal and historical notes on the utility of "deep-etch" electron microscopy for making cell structure/function correlations, John E. Heuser
Genotypic discrepancies arising from imputation, Anthony L. Hinrichs, Robert C. Culverhouse, and Brian K. Suarez
Efficacy of once-daily extended-release topiramate (USL255): A subgroup analysis based on the level of treatment resistance, R. Edward Hogan, Ilan Blatt, Balduin Lawson, Venkatesh Nagaraddi, Toufic A. Fakhoury, Bob Anders, Annie M. Clark, Dawn Laine, Mark B. Halvorsen, and Steve S. Chung
Seroepidemiology of astrovirus MLB1, Lori R. Holtz, Irma K. Bauer, Hongbing Jiang, Robert Belshe, Pamela Freiden, Stacey L. Schultz-Cherry, and David Wang
Genome-wide association study of Arabidopsis thaliana leaf microbial community, Matthew W. Horton, Natacha Bodenhausen, Kathleen Beilsmith, Dazhe Meng, Brian D. Muegge, Sathish Subramanian, M. Madlen Vetter, Bjarni J. Vilhjálmsson, Magnus Nordborg, Jeffrey I. Gordon, and Joy Bergelson
Parallels between cancer and infectious disease, Richard S. Hotchkiss and Lyle L. Moldawer
The kidney tight junction, Jianghui Hou
Landscape of target: Guide homology effects on Cas9-mediated cleavage, Becky Xu Hua Fu, Loren L. Hansen, Karen L. Artiles, Michael L. Nonet, and Andrew Z. Fire
Transglutaminase 2 expression is increased as a function of malignancy grade and negatively regulates cell growth in meningioma, Yin-Cheng Huang, Kuo-Chen Wei, Chen-Nen Chang, Pin-Yuan Chen, Peng-Wei Hsu, Carl P. Chen, Chin-Song Lu, Hung-Li Wang, David H. Gutmann, and Tu-Hsueh Yeh
Clonal architecture of secondary acute myeloid leukemia defined by single-cell sequencing, Andrew E. O. Hughes, Vincent Magrini, Ryan Demeter, Christopher A. Miller, Robert Fulton, Lucinda L. Fulton, William C. Eades, Kevin Elliott, Sharon Heath, Peter Westervelt, Li Ding, Donald F. Conrad, Brian S. White, Jin Shao, Daniel C. Link, John F. DiPersio, Elaine R. Mardis, Richard K. Wilson, Timothy J. Ley, Matthew J. Walter, and Timothy A. Graubert
The bacterial amyloid curli Is associated with urinary source bloodstream infection, Chia Hung, Jonas Marschall, Carey-Ann D. Burnham, Albert S. Byun, and Jeffrey P. Henderson
Draft genome sequence of Acetobacter aceti strain 1023, a vinegar factory isolate, John E. Hung, Christopher P. Mill, Sandra W. Clifton, Vincent Magrini, Ketaki Bhide, Julie A. Francois, Aaron E. Ransome, Lucinda Fulton, Jyothi Thimmapuram, Richard K. Wilson, and T. Joseph Kappock
Roles of ON cone bipolar cell subtypes in temporal coding in the mouse retina, Tomomi Ichinose, Bozena Fyk-Kolodziej, and Jesse Cohn
Neurologic abnormalities in mouse models of the lysosomal storage disorders mucolipidosis II and mucolipidosis III γ, Rachel A. Idol, David F. Wozniak, Hideji Fujiwara, Carla M. Yuede, Daniel S. Ory, Stuart Kornfeld, and Peter Vogel
A fluorescence-coupled assay for gamma aminobutyric acid (GABA) reveals metabolic stress-induced modulation of GABA content in neuroendocrine cancer, Joseph E. Ippolito and David Piwnica-Worms
Stress mediates the relationship between sexual orientation and behavioral risk disparities, Jennifer M. Jabson, Grant W. Farmer, and Deborah J. Bowen
Training needs and supports for evidence-based decision making among the public health workforce in the United States, Rebekah R. Jacob, Elizabeth A. Baker, Peg Allen, Elizabeth A. Dodson, Kathleen Duggan, Robert Fields, Sonia Sequeira, and Ross C. Brownson
Capacity building for evidence-based decision making in local health departments: Scaling up an effective training approach, Julie A. Jacobs, Kathleen Duggan, Paul Erwin, Carson Smith, Elaine Borawski, Judy Compton, Luann D'Ambrosio, Scott H. Frank, Susan Frazier-Kouassi, Peggy A. Hannon, Jennifer Leeman, Avia Mainor, and Ross C. Brownson
Acceptability of, and willingness to pay for, community health insurance in rural India, Ankit Jain, Selva Swetha, Zeena Johar, and Ramesh Raghavan
Nanoparticle incorporation of melittin reduces sperm and vaginal epithelium cytotoxicity, Andrew P. Jallouk, Kelle H. Moley, Kenan Omurtag, Grace Hu, Gregory M. Lanza, Samuel A. Wickline, and Joshua L. Hood
Identification of pathologic features associated with “ulcerative colitis-like” Crohn’s disease, Samuel D. James, Paul E. Wise, Tania Zuluaga-Toro, David A. Schwartz, M. Kay Washington, and Chanjuan Shi
Bicuspid pulmonic valve and pulmonary artery aneurysm, Carlos Jamis-Dow, George Barbier, Mary Watkins, Gregory Lanza, Shelton Caruthers, and Samuel Wickline
Engineering recombinant orsay virus directly in the metazoan host Caenorhabditis elegans, Hongbing Jiang, Carl J. Franz, and David Wang
Relative acidic compartment volume as a lysosomal storage disorder-associated biomarker, Xuntian Jiang, Rohini Sidhu, Daniel S. Ory, Danielle te Vruchte, Anneliese O. Speak, Kerri L. Wallom, Nada Al Eisa, David A. Smith, Christian J. Hendriksz, Louise Simmons, Robin H. Lachmann, Alison Cousins, Ralf Hartung, Eugen Mengel, and et al.
Wnt7b can replace Ihh to induce hypertrophic cartilage vascularization but not osteoblast differentiation during endochondral bone development, Kyu Sang Joeng and Fanxin Long
Uncovering the components of the Francisella tularensis virulence stealth strategy, Bradley D. Jones, Matthew Faron, Jed A. Rasmussen, and Joshua R. Fletcher
Healthy weight regulation and eating disorder prevention in high school students: A universal and targeted web-based intervention, Megan Jones, Katherine T. Lynch, Andrea E. Kass, Amanda Burrows, Joanne W. Williams, Denise E. Wilfley, and Craig B. Taylor
Compressed sampling strategies for tomography, Yan Kaganovsky, Daheng Li, Andrew Holmgren, HyunJu Jeon, Kenneth P. MacCabe, David G. Politte, Joseph A. O'Sullivan, Lawrence Carin, and David J. Brady
Contaminated heparin and outcomes after cardiac surgery: A retrospective propensity-matched cohort study, Heiko A. Kaiser, Arbi Ben Abdallah, Nan Lin, Bethany R. Tellor, Mohammad Helwani, Jennifer R. Smith, Marc R. Moon, and Michael S. Avidan
Anatomic determinants of sacral dysmorphism and implications for safe iliosacral screw placement, Scott P. Kaiser, Michael J. Gardner, Joseph Liu, M. L. Chip Routt Jr., and Saam Morshed
Integrated analysis of germline and somatic variants in ovarian cancer, Krishna L. Kanchi, Kimberly J. Johnson, Charles Lu, Michael D. McLellan, Michael C. Wendl, Qunyuan Zhang, Daniel C. Koboldt, Mingchao Xie, Cyriac Kandoth, Joshua F. McMichael, Matthew A. Wyczalkowski, David E. Larson, Heather K. Schmidt, Christopher A. Miller, Robert S. Fulton, Elaine R. Mardis, Todd E. Druley, Timothy A. Graubert, Richard K. Wilson, Li Ding, and et al
Effects of patient health literacy, patient engagement and a system-level health literacy attribute on patient-reported outcomes: A representative statewide survey, Kimberly A. Kaphingst, Nancy L. Weaver, Ricardo J. Wray, Melissa LR Brown, Trent Buskirk, and Matthew W. Kreuter
Genome-wide association study of CSF levels of 59 Alzheimer’s disease candidate proteins: Significant associations with proteins involved in amyloid processing and inflammation, Celeste M. Karch, Oscar Harari, Carlos Cruchaga, Benjamin J. Ainscough, Sarah Bertlesen, Anne M. Fagan, David M. Holtzman, John C. Morris, Alison M. Goate, and et al
Somatostatin analogues for receptor targeted photodynamic therapy, Slavka Kascakova, Leo J. Hofland, Henriette S. De Bruijn, Yunpeng Ye, Samuel Achilefu, Katy van der Wansem, Angelique van der Ploeg-van den Heuvel, Peter M. van Koetsveld, Michael P. Brugts, Aart-Jan van der Lelij, Henricus J. C. M. Strerenborg, Timo L. M. ten Hagen, Dominic J. Robinson, and Martin P. van Hagen
Rehabilitation following arthroscopic rotator cuff repair: A prospective randomized trial of immobilization compared with early motion, Jay D. Keener, Leesa M. Galatz, Georgia Stobbs-Cucchi, Rebecca Patton, and Ken Yamaguchi
A prospective evaluation of survivorship of asymptomatic degenerative rotator cuff tears, Jay D. Keener, Leesa M. Galatz, Sharlene A. Teefey, William D. Middleton, Karen Steger-May, Georgia Stobbs-Cucchi, Rebecca Patton, and Ken Yamaguchi
Propofol and sevoflurane induce distinct burst suppression patterns in rats, Jonathan D. Kenny, M. Brandon Westover, ShiNung Ching, Emery N. Brown, and Ken Solt
Current surgical treatment strategies for hepatocellular carcinoma in North America, Adeel S. Khan, Kathryn J. Fowler, and William C. Chapman
Geographic separation of domestic and wild strains of Toxoplasma gondii in French Guiana correlates with a monomorphic version of chromosome1a, Asis Khan, Daniel Ajzenberg, Aurelien Mercier, Magalie Demar, Stephane Simon, Marie Laure Darde, Qiuling Wang, Shiv Kumar Verma, Benjamin M. Rosenthal, Jitender P. Dubey, and L. David Sibley
NextGen sequencing reveals short double crossovers contribute disproportionately to genetic diversity in Toxoplasma gondii, Asis Khan, Jahangheer S. Shaik, Michael Behnke, Qiuling Wang, Jitender P. Dubey, Hernan A. Lorenzi, James W. Ajioka, Benjamin M. Rosenthal, and L. David Sibley
Complete absence of the posterior arch of C1: Case report, R. Khanna, Z. A. Smith, B. J. Dlouhy, and N. S. Dahdaleh
International Radical Cystectomy Consortium: A way forward, Adam S. Kibel and et al.
Acute cell viability and nitric oxide release in lateral menisci following closed-joint knee injury in a lapine model of post-traumatic osteoarthritis, Megan L. Killian, Roger C. Haut, and Tammy L. Haut Donahue
SigFuge: Single gene clustering of RNA-seq reveals differential isoform usage among cancer samples, Patrick K. Kimes, Christopher R. Cabanski, Matthew D. Wilkerson, Ni Zhao, Amy R. Johnson, Charles M. Perou, Liza Makowski, Christopher A. Maher, Yufeng Liu, J. S. Marron, and D. Neil Hayes
TrkB agonist antibody pretreatment enhances neuronal survival and long-term sensory motor function following hypoxic ischemic injury in neonatal rats, Gab Seok Kim, Seongeun Cho, James W. Nelson, Gregory J. Zipfel, and Byung Hee Han
Postnatal maintenance of the 5-Ht1a-Pet1 autoregulatory loop by serotonin in the raphe nuclei of the brainstem, Ji-Young Kim, Ana Kim, Zhong-Qiu Zhou, Xian-Yu Liu, and Zhou-Feng Chen
Systematic shifts in the balance of excitation and inhibition coordinate the activity of axial motor pools at different speeds of locomotion, Sandeep Kishore, Martha W. Bagnall, and David L. McLean
Impact of host age and parity on susceptibility to severe urinary tract infection in a murine model, Kimberly A. Kline, Drew J. Schwartz, Nicole M. Gilbert, and Amanda L. Lewis
Re-sequencing expands our understanding of the phenotypic impact of variants at GWAS loci, Daniel C. Koboldt, David E. Larson, Qunyuan Zhang, Ling Lin, Li Ding, Michael D. McLellan, Michele O'Laughlin, Catrina Fronick, Lucinda L. Fulton, Vincent Magrini, Robert S. Fulton, Richard K. Wilson, and et al
Effect of home telemonitoring on glycemic and blood pressure control in primary care clinic patients with diabetes, Richelle J. Koopman, Bonnie J. Wakefield, Jennifer L. Johanning, Lynn E. Keplinger, Robin L. Kruse, Marilee Bomar, Beth Bernt, Douglas S. Wakefield, and David R. Mehr
Is the relationship between binge eating episodes and personality attributable to genetic factors?, Rachel Koren, Melissa A. Munn-Chernoff, Alexis E. Duncan, Kathleen K. Bucholz, Pamela A.F. Madden, Andrew C. Heath, and Arpana Agrawal
Stealth nanotubes: strategies of shielding carbon nanotubes to evade opsonization and improve biodistribution, Nalinikanth Kotagiri and Jin-Woo Kim
The prevalence of species and strains in the human microbiome: A resource for experimental efforts, Laurens Kraal, Sahar Abubucker, Karthik Kota, Michael A. Fischbach, and Makedonka Mitreva
Establishing the need and identifying goals for a curriculum in medical business ethics: A survey of students and residents at two medical centers in Missouri, Elena M. Kraus, Erin Bakanas, Kamal Gursahani, and James M. DuBois
Dynamometer-based measure of spasticity confirms limited association between plantarflexor spasticity and walking function in persons with multiple sclerosis, Theodore R. Kremer, Linda R. Van Dillen, and Joanne M. Wagner
Fast phasic release properties of dopamine studied with a channel biosensor, Geraaldine J. Kress, Hong-Jin Shu, Andrew Yu, Amanda Taylor, Ann Benz, Steve Harmon, and Steven Mennerick
Central memory CD8+ T lymphocytes mediate lung allograft acceptance, Alexander Sasha Krupnick, Xue Lin, Wenjun Li, Ryuiji Higashikubo, Bernd H. Zinselmeyer, Hollyce Hartzler, Kelsey Toth, Jon H. Ritter, Mikhail Y. Berezin, Steven T. Wang, Mark J. Miller, Andrew E. Gelman, and Daniel Kreisel
IL-6 stimulates intestinal epithelial proliferation and repair after injury, Kristine A. Kuhn, Nicholas A. Manieri, Ta-Chiang Liu, and Thaddeus S. Stappenbeck
Age, gender, and cancer but not neurodegenerative and cardiovascular diseases strongly modulate systemic effect of the Apolipoprotein E4 allele on lifespan, Alexander M. Kulminski, Konstantin G. Arbeev, Irina Culminskaya, Liubov Arbeeva, Svetlana V. Ukraintseva, Eric Stallard, Kaare Christensen, Nicole Schupf, Michael A. Province, and Anatoli I. Yashin
Pbx proteins in Cryptococcus neoformans cell wall remodeling and capsule assembly, Pardeep Kumar, Christian Heiss, Felipe H. Santiago-Tirado, Ian Black, Parastoo Azadi, and Tamara L. Doering
Eata, an immunogenic protective antigen of enterotoxigenic Escherichia coli, degrades intestinal mucin, Pardeep Kumar, Qingwei Luo, Tim J. Vickers, Alaullah Sheikh, and James M. Fleckenstein
Keep on laying eggs mama, RNAi my reproductive aging blues away, Sandeep Kumar, Zuzana Kocsisova, and Kerry Kornfeld
The transcriptome of utricle hair cell regeneration in the avian inner ear, Yuan-Chieh Ku, Nicole A. Renaud, Rose A. Veile, Cynthia Helms, Courtney C J Voelker, Mark E. Warchol, and Michael Lovett
High-throughput functional testing of ENCODE segmentation predictions, Jamie C. Kwasnieski, Christopher Fiore, Hemangi G. Chaudhari, and Barak A. Cohen
Rationing lung transplants--procedural fairness in allocation and appeals, Keren Ladin and Douglas W. Hanto
Genome-wide mapping of the distribution of CarD, RNAP σA, and RNAP β on the Mycobacterium smegmatis chromosome using chromatin immunoprecipitation sequencing, Robert Landick, Azra Krek, Michael S. Glickman, Nicholas D. Socci, and Christina L. Stallings
Outpatient parenteral antimicrobial therapy practices among adult infectious disease physicians, Michael A. Lane, Jonas Marschall, Susan E. Beekman, Philip M. Polgreen, Ritu Banerjee, Adam L. Hersh, and Hilary M. Babcock
Increased frequency of Tim-3 expressing T cells is associated with symptomatic West Nile virus infection, Marion C. Lanteri, Michael S. Diamond, Jacqueline P. Law, Glen M. Chew, Shiquan Wu, Heather C. Inglis, Derek Wong, Michael P. Busch, Philip J. Norris, and Lishomwa C. Ndhlovu
Effectiveness of screening hospital admissions to detect asymptomatic carriers of Clostridium difficile: A modeling evaluation, Cristina Lanzas and Erik R. Dubberke
First report of Klebsiella pneumonia carbapenemase-producing Pseudomonas aeruginosa isolated from burn patients in Iran: Phenotypic and genotypic methods, Abdolaziz Rastegar Lari, Leila Azimi, Mohammad Rahbar, Reza Alaghehbandan, and Mahboobeh Sattarzadeh-Tabrizi
Cortical–subcortical interactions in hypersomnia disorders: Mechanisms underlying cognitive and behavioral aspects of the sleep–wake cycle, Linda J. Larson-Prior, Yo-El Ju, and James E. Galvin
