The Open Access Publications collection contains peer-reviewed articles authored by Washington University School of Medicine faculty that have been published in open access journals or authorized by the publishers for open access availability. Open access works are generally defined as being publicly available online and free of most licensing and copyright restrictions. The Bernard Becker Medical Library maintains this collection in support of Washington University’s commitment to the principles of open access publishing and making the scholarly work and research results of our faculty as widely and easily available as possible.
You can find more information about Washington University's Open Access Resolution in Becker Medical Library's Open Access subject guide “OA Resolution at WU”
Submissions from 2009
The metal homeostasis protein, Lsp, of Streptococcus pyogenes is necessary for acquisition of zinc and virulence, Benjamin F. Westin, Audrey Brenot, and Michael G. Caparon
Lack of X-linked inhibitor of apoptosis protein leads to increased apoptosis and tissue loss following neonatal brain injury, Tim West, Madeliene Stump, Gregory Lodygensky, Jeff J. Neil, Mohanish Deshmukh, and David M. Holtzman
Neuroprotective effects of blockers for T-type calcium channels, Norelle C. Wildburger, Avary Lin-Ye, Michelle A. Baird, Debin Lei, and Jianxin Bao
Late life depression with cognitive impairment: Evaluation and treatment, Consuelo H. Wilkins, Jose Mathews, and Yvette I. Sheline
A genome-wide association study of pulmonary function measures in the Framingham heart study, Jemma B. Wilk, Ting-hsu Chen, Daniel J. Gottlieb, Robert E. Walter, Michael W. Nagle, Brian J. Brandler, Richard H. Myers, Ingrid B. Borecki, Edwin K. Silverman, Scott T. Weiss, and George T. O'Connor
Targeting colorectal cancer with anti-epidermal growth factor receptor antibodies: focus on panitumumab, Kerry J. Williams and A. Craig Lockhart
Physical activity and colon cancer prevention: A meta-analysis, Kathleen Yaus Wolin, Yan Yan, Graham A. Colditz, and I. M. Lee
Identification of pediatric septic shock subclasses based on genome-wide expression profiling, Hector R. Wong, Natalie Cvijanovich, Richard Lin, Geoffrey L. Allen, Neal J. Thomas, Douglas F. Willson, Robert J. Freishtat, Nick Anas, Keith Meyer, Paul A. Checchia, Marie Monaco, Kelli Odom, and Thomas P. Shanley
D-chiro-Inositol is absorbed but not synthesised in rodents, Lin Xiaobo, Lina Ma, Chaya Gopalan, and Richard E. Ostlund
Discovering cis-regulatory RNAs in Shewanella genomes by Support Vector Machines, Xing Xu, Yongmei Ji, and Gary D. Stormo
Interactions between beta subunits of the KCNMB family and Slo3: Beta4 selectively modulates Slo3 expression and function, Cheng-Tao Yang, Xu-Hui Zeng, Xiao-Ming Xia, and Christopher J. Lingle
Bcl3 interacts cooperatively with peroxisome proliferator-activated receptor gamma (PPARγ) coactivator 1α to coactivate nuclear receptors estrogen-related receptor α and PPARα, John Yang, R. Sanders Williams, and Daniel P. Kelly
BOLD correlates of trial-by-trial reaction time variability in gray and white matter: A multi-study fMRI analysis, Tal Yarkoni, Deanna M. Barch, Jeremy R. Gray, Thomas E. Conturo, and Todd S. Braver
Dissection of the transformation of primary human hematopoietic cells by the oncogene NUP98-HOXA9, Enas R. Yassin, Nayan J. Sarma, Anmaar M. Abdul-Nabi, James Dombrowski, Ye Han, Akiko Takeda, and Nabeel R. Yaseen
Histone H2AX stabilizes broken DNA strands to suppress chromosome breaks and translocations during V(D)J recombination, Bu Yin, Velibor Savic, Marisa M. Juntilla, Andrea L. Bredemeyer, Katherine S. Yang-Iott, Beth A. Helmink, Gary A. Koretzky, Barry P. Sleckman, and Craig H. Bassing
The mating-specific Gα interacts with a kinesin-14 and regulates pheromone-induced nuclear migration in budding yeast, Sofia V. Zaichick, Metodi V. Metodiev, Scott A. Nelson, Oleksii Durbrovskyi, Edward Draper, John A. Cooper, and David E. Stone
The MUS81 endonuclease is essential for telomerase negative cell proliferation, Sicong Zeng and Qin Yang
Dosage effects of cohesin regulatory factor PDS5 on mammalian development: Implications for cohesinopathies, Bin Zhang, Jufang Chang, Ming Fu, Jie Huang, Rakesh Kashyap, Ezequiel Salavaggione, Sanjay Jain, Kulkarni Shashikant, Matthew A. Deardorff, Maria L. Giovannucci Uzielli, Dale Dorsett, David C. Beebe, Patrick Y. Jay, Robert O. Heuckeroth, Ian Krantz, and Jeffrey Milbrandt
Chemosensitizing and cytotoxic effects of 2-deoxy-D-glucose on breast cancer cells, Fanjie Zhang and Rebecca L. Aft
Degradation of host sphingomyelin is essential for Leishmania virulence, Ou Zhang, Mattie C. Wilson, Wei Xu, Fong-Fu Hsu, John Turk, F. Matthew Kuhlmann, Yingwei Wang, Lynn Soong, Phillip Key, Stephen M. Beverley, and Kai Zhang
N-terminal inactivation domains of β subunits are protected from trypsin digestion by binding within the antechamber of BK channels, Zhe Zhang, Xu-Hui Zeng, Xiao-Ming Xia, and Christopher J. Lingle
Inferring binding energies from selected binding sites, Yue Zhao, David Granas, and Gary D. Stormo
Serine 58 of 14-3-3ζ Is a molecular switch regulating ASK1 and oxidant stress-induced cell death, Jibin Zhou, Zhili Shao, Risto Kerkela, Hidenori Ichijo, Anthony J. Muslin, Celia Pombo, and Thomas Force
Genome-wide identification and analysis of small RNAs originated from natural antisense transcripts in Oryza sativa, Xuefeng Zhou, Ramanjulu Sunkar, Hailing Jin, Jian-Kang Zhu, and Weixiong Zhang
Altered states of telomere deprotection and the two-stage mechanism of replicative aging, Ying Zhou, Sandeep Misri, Jerry W. Shay, Tej K. Pandita, and Woodring E. Wright
Submissions from 2008
Preference transitivity and symbolic representation in capuchin monkeys (Cebus apella), Elsa Addessi, Alessandra Mancini, Lara Crescimbene, Camillo Padoa-Schioppa, and Elisabetta Visalberghi
Xenophagy in herpes simplex virus replication and pathogenesis, Diane E. Alexander and David A. Leib
A non-tumor suppressor role for basal p19ARF in maintaining nucleolar structure and function, Anthony J. Apicelli, Leonard B. Maggi Jr., Angela C. Hirbe, Alexander P. Miceli, Mary E. Olanich, Crystal L. Schulte-Winkeler, Anthony J. Saporita, Michael Kuchenreuther, Jose Sanchez, Katherine Weilbaecher, and Jason D. Weber
Outbreak of postoperative endophthalmitis in a Thai tertiary care center, Anucha Apisarnthanarak, Supanee Jirajariyavej, Kanokporn Thongphubeth, Chananart Yuekyen, David K. Warren, and Victoria J. Fraser
Long-term outcome of an intervention to remove unnecessary urinary catheters, with and without a quality improvement team, in a Thai tertiary care center, Anucha Apisarnthanarak, Akeruetai Suwannakin, Puritat Maungboon, David K. Warren, and Victoria J. Fraser
Case-control study of clinical features of influenza in hospitalized patients, Hilary M. Babcock, Liana R. Merz, Erik R. Dubberke, and Victoria J. Fraser
Comparison of laparoscopic and percutaneous cryoablation of renal tumors: A cost analysis, Khalid Badwan, Keegan Maxwell, Ramakrishna Venkatesh, Robert S. Figenshau, Dan Brown, Cathy Chen, and Sam B. Bahayani
Detection of murine norovirus 1 by using plaque assay, transfection assay, and real-time reverse transcription-PCR before and after heat exposure, Leen Baert, Christiane E. Wobus, Els Van Coillie, Larissa B. Thackray, Johan Debevere, and Mieke Uyttendaele
PPAR signaling in placental development and function, Yaacov Barak, Yoel Sadovsky, and Tali Shalom-Barak
Late endocytic multivesicular bodies intersect the chlamydial inclusion in the absence of CD63, Wandy L. Beatty
Panel construction for mapping in admixed populations via expected mutual information, Sivan Bercovici, Dan Geiger, Liran Shlush, Karl Skorecki, and Alan Templeton
Burkitt lymphoma with cutaneous involvement, David R. Berk, Amy Cheng, Anne C. Lind, and Susan J. Bayliss
Bronchiolar chemokine expression is different after single versus repeated cigarette smoke exposure, Tomoko Betsuyaku, Ichiro Hamamura, Junko Hata, Hiroshi Takahashi, Hiroaki Mitsuhashi, Tracy L. Adair-Kirk, Robert M. Senior, and Masaharu Nishimura
Laparoscopic partial nephrectomy: Fifty cases, Sam B. Bhayani
Robotic assisted laparoscopic partial nephrectomy for suspected renal cell carcinoma: Retrospective review of surgical outcomes of 35 cases, Sam B. Bhayani and Nitin Das
Factors influencing cataract formation after Nd: YAG laser peripheral iridotomy, James C. Bobrow
Early results of the ponseti method for the treatment of clubfoot in distal arthrogryposis, Stephanie Boehm, Noppachart Limpaphayom, Farhang Alaee, Marc F. Sinclair, and Matthew B. Dobbs
What's new in spine surgery, Keith H. Bridwell, Paul A. Anderson, Scott D. Boden, Alexander R. Vaccaro, and Jeffrey C. Wang
Microneme rhomboid protease TgROM1 is required for efficient intracellular growth of Toxoplasma gondii, Fabien Brossier, G. Lucas Starnes, Wandy L. Beatty, and L. David Sibley
Many specialists for suppressing cortical excitation, Andreas Burkhalter
Hemispheric lateralization of a molecular signal for pain modulation in the amygdala, Yarimar Carrasquillo and Robert W. Gereau IV
β1,2-xylosyltransferase Cxt1p is solely responsible for xylose incorporation into Cryptococcus neoformans glycosphingolipids, Sherry A. Castle, Elizabeth A. Owuor, Stephanie H. Thompson, Michelle R. Garnsey, J. Stacey Klutts, Tamara L. Doering, and Steven B. Levery
Acute inflammatory demyelinating polyneuropathy and a unilateral babinski/plantar reflex, Davide Cattano, Brian O’connor, Ra’ad Shakir, Francesco Giunta, and Mark Palazzo
Immune mechanisms responsible for vaccination against and clearance of mucosal and lymphatic norovirus infection, Karen A. Chachu, Anna D. LoBue, David W. Strong, Ralph S. Baric, and Herbert W. Virgin
Ultraconserved elements in the Olig2 promoter, Christina T. L. Chen, David I. Gottlieb, and Barak A. Cohen
Random assembly of SUR subunits in KATP channel complexes, Wayland W.L. Cheng, Ailing Tong, Thomas P. Flagg, and Colin G. Nichols
Design of the Pacemaker REmote Follow-up Evaluation and Review (PREFER) trial to assess the clinical value of the remote pacemaker interrogation in the management of pacemaker patients, Jane Chen, Bruce L. Wilkoff, Wassim Choucair, Todd J. Cohen, George H. Crossley, W Ben Johnson, Luc R. Mongeon, Gerald A. Serwer, and Lou Sherfesee
tRNA modification by GidA/MnmE is necessary for Streptococcus pyogenes virulence: A new strategy to make live attenuated strains, Kyu Hong Cho and Michael G. Caparon
Serial isolates of persistent Haemophilus influenzae in patients with chronic obstructive pulmonary disease express diminishing quantities of the HMW1 and HMW2 adhesins, Deborah M. Cholon, David Cutter, Stephen K. Richardson, Sanjay Sethi, Timothy F. Murphy, Dwight C. Look, and Joseph W. St. Geme III
Prion protein lacks robust cytoprotective activity in cultured cells, Heather M. Christensen and David A. Harris
The 2007 ABC traveling fellowship: Building international orthopaedic bridges, Constance R. Chu, John Antoniou, Brian G. Donley, Steven L. Frick, Alan S. Hilibrand, William M. Ricci, and Alastair S. Younger
Patient compliance with clinical follow-up after total joint arthroplasty, John C. Clohisy, Ganesh V. Kamath, Gregory D. Byrd, Karen Steger-May, and Rick W. Wright
nGASP – the nematode genome annotation assessment project, Avril Coghlan, Tristan J. Fiedler, Sheldon J. McKay, Paul Flicek, Todd W. Harris, Darin Blasiar, nGASP Consortium, and Lincoln D. Stein
The anticonvulsant ethosuximide disrupts sensory function to extend C. elegans lifespan, James J. Collins, Kimberley Evason, Christopher L. Pickett, Daniel L. Schneider, and Kerry Kornfeld
PPAR genomics and pharmacogenomics: Implications for cardiovascular disease, Sharon Cresci
Cutaneous nociception evoked by 15-delta PGJ2 via activation of ion channel TRPA1, Lillian Cruz-Orengo, Ajay Dhaka, Robert J. Heuermann, Timothy J. Young, Michael C. Montana, Eric J. Cavanaugh, Donghee Kim, and Gina M. Story
Interleukin-10 promotes pathological angiogenesis by regulating macrophage response to hypoxia during development, Dru S. Dace, Aslam A. Khan, Jennifer Kelly, and Rajendra S. Apte
The early protective innate immune response against West Nile virus, Stephane Daffis, Melanie A. Samuel, Mehul S. Suthar, Brian K. Keller, Michael Gale Jr, and Michael S. Diamond
apoE isoform-specific disruption of amyloid β peptide clearance from mouse brain, Rashid Deane, Abhay Sagare, Katie Hamm, Margaret Parisi, Steven Lane, Mary Beth Finn, David M. Holtsman, and Berislav V. Zlokovic
Implementing an innovative consent form: The PREDICT experience, Carole Decker, Suzanne V. Arnold, Olawale Olabiyi, Homaa Ahmad, Elizabeth Gialde, Jamie Luark, Lisa Riggs, Terry DeJaynes, Gabriel E. Soto, and John A. Spertus
Area-level poverty and preterm birth risk: A population-based multilevel analysis, Emily A. DeFranco, Min Lian, Louis J. Muglia, and Mario Schootman
Notch-deficient skin induces a lethal systemic B-lymphoproliferative disorder by secreting TSLP, a sentinel for epidermal integrity, Shadmehr Demehri, Zhenyi Liu, Jonghyeob Lee, Meei-Hua Lin, Seth D. Crosby, Christopher J. Roberts, Perry W. Grigsby, Jeffrey H. Miner, Andrew G. Farr, and Raphael Kopan
Conifers have a unique small RNA silencing signature, Elena V. Dolgosheina, Ryan D. Morin, Gozde Aksay, S. Cenk Sahinalp, Vincent J. Magrini, Elaine Mardis, Jim Mattsson, and Peter J. Unrau
A catalog of neutral and deleterious polymorphism in yeast, Scott W. Doniger, Hyun Seok Kim, Devjanee Swain, Daniella Corcuera, Morgan Williams, Shiaw-Pyng Yang, and Justin C. Fay
Effect of senescence on macrophage polarization and angiogenesis, Dru S. Drace and Rajendra S. Apte
Strategies to prevent Clostridium difficile infections in acute care hospitals, Erik R. Dubberke, Dale N. Gerding, David Classen, Kathleen M. Arias, Kelly Podgorny, Deverick J. Anderson, Helen Burstin, David P. Calfee, Susan E. Coffin, Victoria J. Fraser, Frances A. Griffin, Peter Gross, Keith S. Kaye, Michael Klompas, Evelyn Lo, Jonas Marschall, Leonard A. Mermel, Lindsay Nicolle, David A. Pegues, Trish M. Perl, Sanjay Saint, Cassandra D. Salgado, Robert A. Weinstein, Robert Wise, and Deborah S. Yokoe
A woman from Honduras with a painful forearm and fever, Erik R. Dubberke and Gary J. Weil
The PPARα-PGC-1α axis controls cardiac energy metabolism in healthy and diseased myocardium, Jennifer G. Duncan and Brian N. Finck
The absence of cutaneous lymph nodes results in a Th2 response and increased susceptibility to Leishmania major infection in mice, Jan M. Ehrchen, Joannes Roth, Kirsten Roebrock, Georg Varga, Wolfram Domschke, Rodney Newberry, Clemens Sorg, Carsten Muller-Tidow, Cord Sunderkotter, Torsten Kucharzik, and Thomas W. Spahn
The role of p53 in the trafficking of copper-64 to tumor cell nuclei, Martin Eiblmaier, Laura A. Meyer, and Carolyn J. Anderson
Phospholipase Cγ2 modulates integrin signaling in the osteoclast by affecting the localization and activation of Src kinase, Holly Epple, Viviana Cremasco, Kaihua Zhang, Dailing Mao, Gregory D. Longmore, and Roberta Faccio
Eucaryotic diversity in a hypersaline microbial mat, Leah M. Feazel, John R. Spear, Alicia B. Berger, J. Kirk Harris, Daniel N. Frank, Ruth E. Ley, and Norman R. Pace
Do risk factors for suicidal behavior differ by affective disorder polarity?, J. G. Fiedorowicz, A. C. Leon, M. B. Keller, D. A. Soloman, J. P. Rice, and W. H. Coryell
Robotic renal hilar control and robotic clip placement for partial nephrectomy, Robert Figenshau, Sam Bhayani, Ramakrishna Venkatesh, and Agnes Wang
Metagenomic analysis of human diarrhea: Viral detection and discovery, Stacy R. Finkbeiner, Adam F. Allred, Phillip I. Tarr, Eileen J. Klein, Carl D. Kirkwood, and David Wang
Restoring hearing symmetry with two cochlear implants or one cochlear implant and a contralateral hearing aid, Jill B. Firszt, Ruth M. Reeder, and Margaret W. Skinner
Distinct roles for Arp2/3 regulators in actin assembly and endocytosis, Brian J. Galletta, Dennis Y. Chuang, and John A. Cooper
GAD1 single nucleotide polymorphism is in linkage disequilibrium with a child bipolar I disorder phenotype, Barbara Geller, Rebecca Tillman, Kristine Bolhofner, Kathleen Hennessy, and Edwin H. Cook Jr.
Ly6c+ “inflammatory monocytes” are microglial precursors recruited in a pathogenic manner in West Nile virus encephalitis, Daniel R. Getts, Rachael L. Terry, Meghann Teague Getts, Marcus Müller, Sabita Rana, Bimmi Shrestha, Jane Radford, Nico Van Rooijen, Iain L. Campbell, and Nicholas J.C. King
The amphioxus genome illuminates vertebrate origins and cephalochordate biology, Jeremy J. Gibson-Brown and et al
Bacterial community in the crop of the hoatzin, a neotropical folivorous flying bird, Filipa Godoy-Vitorino, Ruth E. Ley, Zhan Gao, Zhiheng Pei, Humberto Ortiz-Zuazaga, Luis R. Pericchi, Maria A. Garcia-Amado, Fabian Michelangeli, Martin L. Blaser, Jeffrey I. Gordon, and Maria G. Dominguez-Bello
Validity and reliability of a system to measure passive tissue characteristics of the lumbar region during trunk lateral bending in people with and people without low back pain, Sara P. Gombatto, Joseph W. Klaesner, Barbara J. Norton, Scott D. Minor, and Linda R. Van Dillen
Multiple distinct subtypes of GABAergic neurons in mouse visual cortex identified by triple immunostaining., Yuri Gonchar, Quanxin Wang, and Andreas Burkhalter
A novel actin-related protein is associated with daughter cell formation in Toxoplasma gondii, Jennifer L. Gordon, Wandy L. Beatty, and L. David Sibley
The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae, Roy Gross, Carlos A. Guzman, Mohammed Sebaihia, Vítor AP Martins dos Santos, Dietmar H. Pieper, Ralf Koebnik, Melanie Lechner, Daniela Bartels, Jens Buhrmester, Jomuna V. Choudhuri, Thomas Ebensen, Lars Gaigalat, Stefanie Herrmann, Amit N. Khachane, Christof Larisch, Stefanie Link, Burkhard Linke, Folker Meyer, Sascha Mormann, Diana Nakunst, Christian Rückert, Susanne Schneiker- Bekel, Kai Schulze, Frank-Jörg Vorhölter, Tetyana Yevsa, Jacquelyn T. Engle, William E. Goldman, Alfred Pühler, Ulf B. Göbel, Alexander Goesmann, Helmut Blöcker, Olaf Kaiser, and Rosa Martinez- Arias
The mammalian ortholog of Drosophila MOF that acetylates histone H4 lysine 16 Is essential for embryogenesis and oncogenesis, Arun Gupta, T. Geraldine Guerin-Peyrou, Girdhar G. Sharma, Changwon Park, Manjula Agarwal, Ramesh K. Ganju, Shruti Pandita, Kyunghee Choi, Saraswati Sukumar, Raj K. Pandita, Thomas Ludwig, and Tej K. Pandita
Venous thromboembolic disease after total hip and knee arthroplasty, Steven B. Haas, Robert L. Barrack, Geoffrey Westrich, and Paul F. Lachiewicz
Sex dependent imprinting effects on complex traits in mice, Reinmar Hager, James M. Cheverud, Larry J. Leamy, and Jason B. Wolf
Long-term stability and heritability of telephone interview measures of alcohol consumption and dependence, Narelle K. Hansell, Arpana Agrawal, John B. Whitfield, Katherine I. Morley, Gu Zhu, Penelope A. Lind, Michele L. Pergadia, Pamela A.F. Madden, Richard D. Todd, Andrew C. Heath, and Nicholas G. Martin
Plasma membrane deformation by circular arrays of ESCRT-III protein filaments, Phyllis I. Hanson, Robyn Roth, Yuan Lin, and John E. Heuser
Role of viral hemagglutinin glycosylation in anti-influenza activities of recombinant surfactant protein D, Kevan L. Hartshorn, Richard Webby, Mitchell R. White, Tesfaldet Tecle, Clark Pan, Susan Boucher, Rodney J. Moreland, Erika C. Crouch, and Ronald K. Scheule
DNA-level diversity and relatedness of Helicobacter pylori strains in shantytown families in peru and transmission in a developing-country setting, Phabiola M. Herrera, Melissa Mendez, Billie Velapatiõ, Livia Santivaëz, Jacqueline Balqui, S. Alison Finger, Jonathan Sherman, Mirko Zimic, Lilia Cabrera, Jose Watanabe, Carlos Rodríguez, Robert H. Gilman, and Douglas E. Berg
Loop-mediated isothermal amplification assay for rapid detection of common strains of Escherichia coli, Joshua Hill, Shilpa Beriwal, Ishwad Chandra, Vinod K. Paul, Aarti Kapil, Tripti Singh, Robert M. Wadowsky, Vinita Singh, Ankur Goyal, Timo Jahnukainen, James R. Johnson, Phillip I. Tarr, and Abhay Vats
Long-term effects of caloric restriction or exercise on DNA and RNA oxidation levels in white blood cells and urine in humans, Tim Hofer, Luigi Fontana, Stephen D. Anton, Edward P. Weiss, Dennis Villareal, Bhaskar Malayappan, and Christiaan Leeuwenburgh
Identification of a novel picornavirus related to cosaviruses in a child with acute diarrhea+, Lori R. Holtz, Stacy R. Finkbeiner, Carl D. Kirkwood, and David Wang
