The Open Access Publications collection contains peer-reviewed articles authored by Washington University School of Medicine faculty that have been published in open access journals or authorized by the publishers for open access availability. Open access works are generally defined as being publicly available online and free of most licensing and copyright restrictions. The Bernard Becker Medical Library maintains this collection in support of Washington University’s commitment to the principles of open access publishing and making the scholarly work and research results of our faculty as widely and easily available as possible.
You can find more information about Washington University's Open Access Resolution in Becker Medical Library's Open Access subject guide “OA Resolution at WU”
Submissions from 2012
Interaction of CarD with RNA polymerase mediates Mycobacterium tuberculosis viability, rifampin resistance, and pathogenesis, Leslie A. Weiss, Phillip G. Harrison, Bryce E. Nickels, Michael S. Glickman, Elizabeth A. Campbell, Seth A. Darst, and Christina L. Stallings
Colony organization in the green alga Botryococcus braunii (Race B) is specified by a complex extracellular matrix, Taylor L. Weiss, Robyn Roth, Carrie Goodson, Stanislav Vitha, Ian Black, Parastoo Azadi, Jannette Rusch, Andreas Holzenburg, Timothy P. Devarenne, and Ursula Goodenough
Prostaglandin metabolite induces inhibition of TRPA1 and channel-dependent nociception, Yingqi Weng, Patricia A. Batista-Schepman, Marie E. Barabas, Eli Q. Harris, Thomas B. Dinsmore, Elena A. Kossyreva, Audra M. Foshage, Michelle H. Wang, Matthew J. Schwab, Victoria M. Wang, Cheryl L. Stucky, and Gina M. Story
Strategic insight and age-related goal-neglect influence risky decision-making, Andrew Westbrook, Bruna S. Martins, Tal Yarkoni, and Todd S. Braver
Peripheral-blood stem cells versus bone marrow from unrelated donors, Peter Westervelt and et al
A model of spatially restricted transcription in opposing gradients of activators and repressors, Michael A. White, Davis S. Parker, Scott Barolo, and Barak A. Cohen
Enzyme-replacement therapy in life-threatening hypophosphatasia, Michael P. Whyte, William H. McAlister, and et al
Absence of Ca2+-stimulated adenylyl cyclases leads to reduced synaptic plasticity and impaired experience-dependent fear memory, L. Wieczorek, D. Majumdar, T. A. Wills, L. Hu, D. G. Winder, D. J. Webb, and L. J. Muglia
In vivo human apolipoprotein E isoform fractional turnover rates in the CNS, Kristin R. Wildsmith, Jacob M. Basak, Bruce W. Patterson, Yuriy Pyatkivskyy, Jungsu Kim, Kevin E. Yarasheski, Jennifer X. Wang, Kwasi G. Mawuenyega, Hong Jiang, Maia Parsadanian, Hyejin Yoon, Tom Kasten, Wendy C. Sigurdson, Chengjie Xiong, Alison Goate, David M. Holtzman, and Randall J. Bateman
Dendritic cell based PSMA immunotherapy for prostate cancer using a CD40-targeted adenovirus vector, Briana Jill Williams, Shilpa Bhatia, Lisa K. Adams, Susan Boling, Jennifer L. Carroll, Xiao-Lin Li, Donna L. Rogers, Nikolay Korokhov, Imre Kovesdi, Alexander V. Pereboev, David T. Curiel, and Michael Mathis
No evidence of xenotropic murine leukemia virus-related virus transmission by blood transfusion from infected rhesus macaques, Dhanya K. Williams, Teresa A. Galvin, Yamei Gao, Christina O'Neill, Dustin Glasner, and Arifa S. Khan
Effectiveness of long-acting reversible contraception, Brooke Winner, Jeffrey F. Peipert, Quihong Zhao, Christina Buckel, Tessa Madden, Jenifer E. Allsworth, and Gina M. Secura
Promoting physical activity in patients with colon adenomas: a randomized pilot intervention trial, Kathleen Y. Wolin, Casey Fagin, Aimee S. James, and Dayna S. Early
Childhood school segregation and later life sense of control and physical performance in the African American Health cohort, Fredric D. Wolinsky, Elena M. Andresen, Theodore K. Malmstrom, J. P. Miller, Mario Schootman, and Douglas K. Miller
The coronary CT angiography vision protocol: A prospective observational imaging cohort study in patients undergoing non-cardiac surgery, Pamela K. Woodard and et al
Coronary CT angiography versus standard evaluation in acute chest pain, Pamela Woodard, Michael E. Mullins, and et al
Outcome of revision anterior cruciate ligament reconstruction: a systematic review, Rick W. Wright, Corey S. Gill, Ling Chen, Robert H. Brophy, Matthew J. Matava, Matthew V. Smith, and Nathan A. Mall
Synaptic NMDA receptors mediate hypoxic excitotoxic death, Christine M. Wroge, Joshua Hogins, Larry Eisenman, and Steven Mennerick
Chemokine GPCR signaling inhibits beta-catenin during Zebrafish axis formation, Shu-Yu Wu, Jimann Shin, Diane S. Sepich, and Lilianna Solnica-Krezel
Sequence analysis of the human virome in febrile and afebrile children, Kristine M. Wylie, Kathie A. Mihindukulasuriya, Erica Sodergren, George M. Weinstock, and Gregory A. Storch
Novel bacterial taxa in the human microbiome, Kristine M. Wylie, Rebecca M. Truty, Thomas J. Sharpton, Kathie A. Mihindukulasuriya, Yanjiao Zhou, Hongyu Gao, Erica Sodergren, George M. Weinstock, and Katherine S. Pollard
Bcl-x Pre-mRNA splicing regulates brain injury after neonatal hypoxia-ischemia, Qingli Xiao, Andria L. Ford, Jan Xu, Ping Yan, Kuang-Yung Lee, Ernesto Gonzales, Tim West, David M. Holtzman, and Jin-Moo Lee
Role of the Skp1 prolyl-hydroxylation/ glycosylation pathway in oxygen dependent submerged development of Dictyostelium, Yuechi Xu, Zhuo A. Wang, Rebekah S. Green, and Christopher M. West
Social, economic, and resource predictors of variability in household air pollution from cookstove emissions, Gautam N. Yadama, John Peipert, Manoranjan Sahu, Pratim Biswas, and Venkat Dyda
18FDG PET-CT imaging detects arterial inflammation and early atherosclerosis in HIV-infected adults with cardiovascular disease risk factors, Kevin E. Yarasheski, Erin Laciny, E. T. Overton, Dominic N. Reeds, Michael Harrod, Steven Baldwin, and Victor G. Davila-Roman
Auricular point acupressure for chronic low back pain: A feasibility study for 1-week treatment, Chao-Hsing Yeh, Lung-Chang Chien, Yi-Chien Chiang, and Li-Chun Huang
Reduction in nausea and vomiting in children undergoing cancer chemotherapy by either appropriate or sham auricular acupuncture points with standard care, Chao Hsing Yeh, Lung-Chang Chien, Yi Chien Chiang, Su Wen Lin, Chen Kuan Huang, and Dianxu Ren
Geminin regulates the transcriptional and epigenetic status of neuronal fate-promoting genes during mammalian neurogenesis, Dhananjay Yellajoshyula, Jong-won Lim, Dominic M. Thompson, Jacob S. Witt, Ethan S. Patterson, and Kristen L. Kroll
Neonatal diethylstilbestrol exposure alters the metabolic profile of uterine epithelial cells, Yan Yin, Congxing Lin, G. Michael Veith, Hong Chen, Maulik Dhandha, and Liang Ma
Enhanced surgical site infection surveillance following hysterectomy, vascular, and colorectal surgery, Deborah S. Yokoe, Yosef Khan, Margaret A. Olsen, David C. Hooper, Maurice Greenbaum, Johanna Vostok, Julie Lankiewicz, Victoria J. Fraser, and Kurt B. Stevenson
Adaptive immunity restricts replication of novel murine astroviruses, Christine C. Yokoyama, Joy Loh, Guoyan Zhao, Thaddeus S. Stappenbeck, David Wang, Henry V. Huang, Herbert W. Virgin, and Larissa B. Thackray
WormBase 2012: More genomes, more data, new website, Karen Yook, Tamberlyn Bieri, Bill Nash, Philip Ozersky, and John Spieth
A systematic study of gene expression variation at single-nucleotide resolution reveals widespread regulatory roles for uAUGs, Yue Yun, T.M. Ayodele Adesanya, and Robi D. Mitra
A critical cell-intrinsic role for serum response factor in glial specification in the CNS, Paul P.Y. Yu and Narendrakumar Ramanan
Detection thresholds of macaque otolith afferents, Xiong-Jie Yu, J David Dickman, and Dora E. Angelaki
Two-year outcomes after transcatheter or surgical aortic-valve replacement, Alan Zajarias and et al
Wip1 and p53 contribute to HTLV-1 Tax-induced tumorigenesis, Linda Zane, Junichiro Yasunaga, Yu Mitagami, Venkat Yedavalli, Sai-Wen Tang, Chia-Yen Chen, Lee Ratner, Xiongbin Lu, and Kuan-Teh Jeang
Characterization of scale-free properties of human electrocorticography in awake and slow wave sleep states, John M. Zempel, David G. Politte, Matthew Kelsey, Ryan Verner, Tracy S. Nolan, Abbas Babajani-Feremi, Fred Prior, and Linda J. Larson-Prior
Sigma-2 ligands induce tumour cell death by multiple signalling pathways, Chenbo Zeng, Justin M. Rothfuss, Jun Zhang, Wenhua Chu, Suwanna Vangveravong, Zhude Tu, Fenghui Pan, Katherine Chang, Richard S. Hotchkiss, and Robert H. Mach
Near infrared imaging of EGFR of oral squamous cell carcinoma in mice administered arsenic trioxide, Lingbo Zhang, Kezheng Wang, Falin Zhao, Weiping Hu, Junjie Chen, Gregory M. Lanza, Baozhong Shen, and Bin Zhang
Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function, Xiaoming Zhang, Jing Xia, Yifan E. Lii, Blanca E. Barrera-Figueroa, Xuefeng Zhou, Shang Gao, Lu Lu, Dongdong Niu, Zheng Chen, Christy Leung, Timothy Wong, Huiming Zhang, Jianhua Guo, Yi Li, Renyi Liu, Wanqi Liang, Jian-Kang Zhu, Weixiong Zhang, and Hailing Jin
Image quality analysis of high-density diffuse optical tomography incorporating a subject-specific head model, Yuxuan Zhan, Adam T. Eggebrecht, Joseph P. Culver, and Hamid Dehghani
Singular value decomposition based regularization prior to spectral mixing improves crosstalk in dynamic imaging using spectral diffuse optical tomography, Yuxuan Zhan, Adam T. Eggebrecht, Joseph P. Culver, and Hamid Dehghani
Conserved motifs and prediction of regulatory modules in Caenorhabditis elegans, Guoyan Zhao, Nnamdi Ihuegbu, Mo Lee, Larry Schriefer, Ting Wang, and Gary D. Stormo
Whole-exome sequencing and an iPSC-derived cardiomyocyte model provides a powerful platform for gene discovery in left ventricular hypertrophy, D. Zhi, M. R. Irvin, C. C. Gu, A. J. Stoddard, R. Lorier, A. Matter, D. C. Rao, V Srinivasasainagendra, H. K. Tiwari, A. Turner, U. Broeckel, and D. K. Arnett
Glaucoma-induced degeneration of retinal ganglion cells prevented by hypoxic preconditioning: A model of glaucoma tolerance, Yanli Zhu, Lihong Zhang, Jimena F. Schmidt, and Jeffrey M. Gidday
Risk factors for mixed complicated skin and skin structure infections to help tailor appropriate empiric therapy, Marya Zilberberg, Scott T. Micek, Marin H. Kollef, Ahmed Shelbaya, and Andrew F. Shorr
Submissions from 2011
Case-control association testing by graphical modeling for the Genetic Analysis Workshop 17 mini-exome sequence data, Haley J. Abel and Alun Thomas
Principal component analysis of dynamic relative displacement fields estimated from MR images, Teresa M. Abney, Yuan Feng, Robert Pless, Ruth J. Okamoto, Guy M. Genin, and Philip V. Bayly
HelmCoP: An online resource for helminth functional genomics and drug and vaccine targets prioritization, Sahar Abubucker, John Martin, Christina M. Taylor, and Makedonka Mitreva
Effect of obesity, serum lipoproteins, and apolipoprotein E genotypes on mortality in hospitalized elderly patients, Filomena Addante, Daniele Sancarlo, Massimiliano Copetti, Carlo Scarcelli, Maria Grazia Longo, Valeria Niro, Giulia Paroni, Fabio Pellegrini, Luigi Fontana, and Alberto Pilotto
Arhgap24 inactivates Rac1 in mouse podocytes, and a mutant form is associated with familial focal segmental glomerulosclerosis, Shreeram Akilesh, Hani Suleiman, Christine Stander, Haiyang Yu, Peter Lavin, Rasheed Gbadegesin, Corinne Antignac, Martin Pollack, Jeffrey B. Kopp, Michelle P. Winn, and Andrey S. Shaw
Exome sequencing identifies an MYH3 mutation in a family with distal arthrogryposis type 1, David M. Alvarado, Jillian G. Buchan, Christina A. Gurnett, and Matthew B. Dobbs
An RNA interference-based screen of transcription factor genes identifies pathways necessary for sensory regeneration in the avian inner ear, David M. Alvarado, R. D. Hawkins, Stavros Bashiardes, Rose A. Veile, Yuan-Chieh Ku, Kara E. Powder, Meghan K. Spriggs, Judith D. Speck, Mark E. Warchol, and Michael Lovett
A knock-in mouse model for the R120G mutation of alphaBcrystallin recapitulates human hereditary myopathy and cataracts, Usha P. Andley, Paul D. Hamilton, Nathan Ravi, and Conrad C. Weihl
Dynamic nucleosome-depleted regions at androgen receptor enhancers in the absence of ligand in prostate cancer cells, Claudia Andreu-Vieyra, John Lai, Benjamin P. Berman, Baruch Frenkel, Li Jia, Peter A. Jones, and Gerhard A. Coetzee
Coding of stereoscopic depth information in visual areas V3 and V3A, Akiyuki Anzai, Syed A. Chowdhury, and Gregory C. DeAngelis
Prevalence of nasal carriage of mupirocin-resistant Staphylococcus aureus among hospitalized patients in Thailand, Anucha Apisarnthanarak, David K. Warren, and Victoria J. Fraser
Prevention of intraoperative awareness in a high-risk surgical population, Michael S. Avidan, Beth A. Burnside, Lini Zhang, Saima Kamal, Brian Torres, Alex S. Evers, Stephen Gradwohl, Ben J. Palanca, Nan Lin, David Glick, Leah Karl, Michael O'Connor, and George A. Mashour
Complement-mediated neutralization of dengue virus requires mannose-binding lectin, Panisadee Avirutnan, Richard E. Hauhart, Mary A. Marovich, Peter Garred, John P. Atkinson, and Michael S. Diamond
Inhibition of hypoxia-induced miR-155 radiosensitizes hypoxic lung cancer cells, Imran A. Babar, Jennifer Czochor, Allison Steinmetz, Joanne B. Weidhaas, Peter M. Glazer, and Frank J. Slack
Daily or intermittent budesonide in preschool children with recurrent wheezing, Leonard B. Bacharier, Robert C. Strunk, Avraham Beigelman, and et al
Cell wall chitosan is necessary for virulence in the opportunistic pathogen Cryptococcus neoformans, Lorina G. Baker, Charles A. Specht, and Jennifer K. Lodge
Diagnosis and management of fetal growth restriction, Jacqueline E. A. K. Bamfo and Anthony O. Odibo
Residual Cx45 and its relationship to Cx43 in murine ventricular myocardium, Mingwei Bao, Evelyn M. Kanter, Richard Y.C. Huang, Stephan Maxeiner, Marina Frank, Yan Zhang, Richard B. Schuessler, Timothy W. Smith, R. Reid Townsend, Henry W. Rohrs, Viviana M. Berthoud, Klaus Willecke, James G. Laing, and Kathryn A. Yamada
OSCAR is a collagen receptor that costimulates osteoclastogenesis in DAP12-deficient humans and mice, Alexander David Barrow, Marina Cella, Marco Colonna, Nicolas Raynal, Thomas Levin Anderson, David A. Slatter, Dominique Bihan, Nicholas Pugh, Taesoo Kim, Jaerang Rho, Takako Nedishi-Koga, Jean-Marie Delaisse, Hiroshi Takayanagi, Joseph Lorenzo, and et al.
Human parvovirus 4 as potential cause of encephalitis in children, India, Laura A. Benjamin, Penny Lewthwaite, Ravi Vasanthapuram, Guoyan Zhao, Colin Sharp, Peter Simmonds, David Wang, and Tom Solomon
A recurrent missense mutation in GJA3 associated with autosomal dominant cataract linked to chromosome 13q, Thomas M. Bennett and Alan Shiels
Renal tumor models: Evaluation of ease of implementation, quality of composition, and imaging characteristics, Brian M. Benway, Jose M. Cabello, Alana C. Desai, Robert S. Figenshaw, and Sam B. Bhayani
6-OHDA generated ROS induces DNA damage and p53- and PUMA-dependent cell death, Alison I. Bernstein, Sean P. Garrison, Gerard P. Zambetti, and Karen L. O'Malley
Cross-cultural adaptation and validation of SNOT-20 in Portuguese, Thiago Freire Pinto Bezerra, Jay F. Piccirillo, Marco Aurélio Fornazieri, Renata R. de M. Pilan, Tatiana Regina Teles Abdo, Fabio de Rezende Pinna, Francini Grecco de Melo Padua, and Richard Louis Voegels
Autophagy switches to apoptosis in prostate cancer cells infected with melanoma differentiation associated gene-7/interleukin-24 (mda-7/IL-24), Sujit K. Bhutia, Swadesh K. Das, Belal Azab, Rupesh Dash, Zhao-zhong Su, Seok-Geun Lee, Paul Dent, David T. Curiel, Devanand Sarkar, and Paul B. Fisher
Strategic manipulations for associative memory and the role of verbal processing abilities in schizophrenia, Aaron Bonner-Jackson and Deanna M. Barch
Vacuolization of mucolipidosis type II mouse exocrine gland cells represents accumulation of autolysosomes, Marielle Boonen, Eline van Meel, Viola Oorschot, Judith Klumperman, and Stuart Kornfeld
What happened to research in clinical microbiology in the United States?, Paul P. Bourbeau and Carey-Ann D. Burnham
Inducing vortices in a Bose-Einstein condensate using holographically produced light beams, Johannes F S Brachmann, Waseem S. Bakr, Jonathon I. Gillen, Amy Peng, and Markus Greiner
Interferon regulatory factor-1 (IRF-1) shapes both innate and CD8⁺ T cell immune responses against West Nile virus infection, James D. Brien, Stephane Daffis, Helen M. Lazear, Hyelim Cho, Mehul S. Suthar, Michael Gale Jr, and Michael S. Diamond
Innate and cytokine-driven signals, rather than microbial antigens, dominate in natural killer T cell activation during microbial infection, Manfred Brigl, Raju V.V. Tatituri, Gerald F.M. Watts, Veemal Bhowruth, Elizabeth A. Leadbetter, Nathaniel Barton, Nadia R. Cohen, Fong-Fu Hsu, Gurdyal S. Besra, and Michael B. Brenner
Current measures of metabolic heterogeneity within cervical cancer do not predict disease outcome, Frank J. Brooks and Perry W. Grigsby
Effect of short-duration low-magnitude cyclic loading versus immobilization on tendon-bone healing after ACL reconstruction in a rat model, Robert H. Brophy, David Kovacevic, Carl W. Imhauser, Mark Stasiak, Asheesh Bedi, Alice J.S. Fox, Xiang-Hua Deng, and Scott A. Rodeo
Are dropped osteoarticular bone fragments safely reimplantable in vivo?, Benjamin Bruce, Shahin Sheibani-Rad, Deborah Appleyard, Ryan P. Calfee, Steven E. Reinert, Kimberle C. Chapin, and Christopher W. DiGiovanni
Rapid communication with a “P300” matrix speller using electrocorticographic signals (ECoG), Peter Brunner, Anthony L. Ritaccio, Joseph F. Emrich, Horst Bischof, and Gerwin Schalk
Monoclonal antibodies for copper-64 PET dosimetry and radioimmunotherapy, Jeffrey N. Bryan, Fang Jia, Huma Mohsin, Geethapriya Sivaguru, Carolyn J. Anderson, William H. Miller, Carolyn J. Henry, and Michael R. Lewis
Myxoid chondrosarcoma of the phalanx with an EWS translocation: A case report and review of the literature, David B. Bumpass, Michael Kyriakos, David A. Rubin, Paul R. Manske, and Charles A. Goldfarb
Photo Quiz: A 32-year-old male with a 2-month history of cough, fatigue, and weight loss, Carey-Ann D. Burnham and W. Michael Dunne Jr.
Effects of human immunodeficiency virus and metabolic complications on myocardial nutrient metabolism, blood flow, and oxygen consumption: A cross-sectional analysis, W Todd Cade, Dominic N. Reeds, E Turner Overton, Pilar Herrero, Alan D. Waggoner, Victor G. Davila-Roman, Sherry Lassa-Claxton, Robert J. Gropler, Pablo F. Soto, Melissa J. Krauss, Kevin E. Yarasheski, and Linda R. Peterson
False belief vs. false photographs: A test of theory of mind or working memory?, Alicia Callejas, Gordon L. Shulman, and Maurizio Corbetta
Raw sewage harbors diverse viral populations, Paul G. Cantalupo, Byron Calgua, Guoyan Zhao, Ayalkibet Hundesa, Adam D. Wier, Josh P. Katz, MIchael Grabe, Roger W. Hendrix, Rosina Girones, David Wang, and James M. Pipas
Moving pictures of the human microbiome, J Gregory Caporaso, Christian L. Lauber, Elizabeth K. Costello, Donna Berg-Lyons, Antonio Gonzalez, Jesse Stombaugh, Dan Knights, Pawel Gajer, Jacques Ravel, Noah Fierer, Jeffrey I. Gordon, and Rob Knight
Physician and nurse acceptance of technicians to screen for geriatric syndromes in the emergency department, Chris Carpenter, Richard T. Griffey, Susan Stark, Craig M. Coopersmith, and Brian F. Gage
RNA expression of the molecular signature genes for metastasis in colorectal cancer, Luciano Carvalho, Jinsheng Yu, Gilberto Schwartsmann, Howard L. McLeod, and James W. Fleshman
Sequencing the genome of the Burmese python (Python molurus bivittatus) as a model for studying extreme adaptations in snakes, Todd A. Castoe, AP Jason de Koning, Kathryn T. Hall, Ken D. Yokoyama, Wanjun Gu, Eric N. Smith, Cedric Feschotte, Peter Uetz, David A. Ray, Jason Dobry, Robert Bogden, Stephen P. Mackessy, Anne M. Bronikowski, Wesley C. Warren, Stephen M. Secor, and David D. Pollock
Total error shift patterns for daily CT on rails image-guided radiotherapy to the prostate bed, Ronaldo Cavalieri, Hiram A. Gay, Jingxia Liu, Maria C. Ferreira, Helvecio C. Mota, Claudio H. Sibata, and Ron R. Allison
Methicillin-resistant Staphylococcus aureus USA300 clone as a cause of Lemierre's syndrome, Jake M. Chanin, Luis A. Marcos, Bithika M. Thompson, Roger D. Yusen, W. Michael Dunne Jr., David K. Warren, and Carlos A Q Santos
Male influence on infant feeding in rural Guatemala and implications for child nutrition interventions, Anita N. Chary, Sarah E. Messmer, and Peter J. Rohloff
A comparison of vestibular spatiotemporal tuning in macaque parietoinsular vestibular cortex, ventral intraparietal area, and medial superior temporal area, Aihua Chen, Gregory C. DeAngelis, and Dora E. Angelaki
Convergence of vestibular and visual self-motion signals in an area of the posterior sylvian fissure, Aihua Chen, Gregory C. DeAngelis, and Dora E. Angelaki
Representation of vestibular and visual cues to self-motion in ventral intraparietal cortex, Aihua Chen, Gregory C. DeAngelis, and Dora E. Angelaki
Oxytocin receptor (OXTR) polymorphisms and attachment in human infants, Frances S. Chen, Maria E. Barth, Stephen L. Johnson, Ian H. Gotlib, and Susan C. Johnson
A genetic risk score combining ten psoriasis risk loci improves disease prediction, Haoyan Chen, Annie Poon, Celestine Yeung, Cynthia Helms, Jennifer Pons, Anne M. Bowcock, Pui-Yan Kwok, and Wilson Liao
